➜ ExampleIG sushi . info Running SUSHI v1.3.2 (implements FHIR Shorthand specification v1.1.0) info Arguments: info /Users/preston/Developer/git/ExampleIG info No output path specified. Output to . info Using configuration file: /Users/preston/Developer/git/ExampleIG/sushi-config.yaml info Importing FSH text... info Preprocessed 1 documents with 0 aliases. info Imported 1 definitions and 0 instances. info Checking local cache for hl7.fhir.r4.core#4.0.1... info Found hl7.fhir.r4.core#4.0.1 in local cache. info Loaded package hl7.fhir.r4.core#4.0.1 (node:95015) Warning: Accessing non-existent property 'INVALID_ALT_NUMBER' of module exports inside circular dependency (Use `node --trace-warnings ...` to show where the warning was created) (node:95015) Warning: Accessing non-existent property 'INVALID_ALT_NUMBER' of module exports inside circular dependency info Converting FSH to FHIR resources... info Converted 1 FHIR StructureDefinitions. info Exporting FHIR resources as JSON... info Exported 1 FHIR resources as JSON. info Assembling Implementation Guide sources... info Generated ImplementationGuide-fhir.example.json info Assembled Implementation Guide sources; ready for IG Publisher. info The sample-ig located at https://github.com/FHIR/sample-ig contains scripts useful for downloading and running the IG Publisher. ╔════════════════════════ SUSHI RESULTS ══════════════════════════╗ ║ ╭──────────┬────────────┬───────────┬─────────────┬───────────╮ ║ ║ │ Profiles │ Extensions │ ValueSets │ CodeSystems │ Instances │ ║ ║ ├──────────┼────────────┼───────────┼─────────────┼───────────┤ ║ ║ │ 1 │ 0 │ 0 │ 0 │ 0 │ ║ ║ ╰──────────┴────────────┴───────────┴─────────────┴───────────╯ ║ ║ ║ ╠═════════════════════════════════════════════════════════════════╣ ║ Fin-tastic job! 0 Errors 0 Warnings ║ ╚═════════════════════════════════════════════════════════════════╝ ➜ ExampleIG java -Xmx4g -jar org.hl7.fhir.publisher.jar -ig . FHIR IG Publisher Version 1.1.0 (Git# e654d867a231). Built 2020-07-01T02:23:14.763Z (345 days old) File log: /var/folders/xb/xq61v3zj2tx_nvf6sjmly3580000gn/T/fhir-ig-publisher-tmp.log Detected Java version: 16.0.1 from /usr/local/Cellar/openjdk/16.0.1/libexec/openjdk.jdk/Contents/Home on x86_64 (64bit). 4096MB available Parameters: -ig . dir = /Users/preston/Developer/git/ExampleIG, path = /Users/preston/.rvm/gems/ruby-2.7.2/bin:/Users/preston/.rvm/gems/ruby-2.7.2@global/bin:/Users/preston/.rvm/rubies/ruby-2.7.2/bin:/Users/preston/.rvm/bin:/usr/local/sbin:/usr/local/opt/openjdk/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Applications/VMware Fusion.app/Contents/Public:/Library/Apple/usr/bin:/Users/preston/.nvm/versions/node/v16.3.0/bin Run time = Friday, June 11, 2021 at 3:09:37 PM Mountain Standard Time (2021-06-11T15:09:37-07:00) Package Cache: /Users/preston/.fhir/packages (00:00.0018) Load Template from fhir.base.template#current (00:00.0521) onLoad.findSpreadsheets: onLoad.updateIg: [xslt] Processing /Users/preston/Developer/git/ExampleIG/template/onLoad-ig-working.xml to /Users/preston/Developer/git/ExampleIG/template/onLoad-ig-updated.xml [xslt] Loading stylesheet /Users/preston/Developer/git/ExampleIG/template/scripts/onLoad.xslt onLoad.extend: onLoad: Root directory: /Users/preston/Developer/git/ExampleIG (00:04.0880) Core Package hl7.fhir.r4.core#4.0.1 Terminology Cache is at /Users/preston/Developer/git/ExampleIG/input-cache/txcache. 1 files in cache (00:09.0766) Connect to Terminology Server at http://tx.fhir.org (00:09.0768) Load Package hl7.fhir.pubpack#0.0.6 Load Package hl7.fhir.xver-extensions#0.0.4 Initialization complete (00:10.0503) Load Content (00:10.0503) Processing Conformance Resources (00:10.0567) Generating Narratives (00:10.0809) Validating Resources (00:10.0810) Processing Provenance Records (00:10.0810) Generating Outputs in /Users/preston/Developer/git/ExampleIG/output (00:10.0810) onGenerate.checkVersions: [xslt] Processing /Users/preston/Developer/git/ExampleIG/template/onGenerate-ig-working.xml to /Users/preston/Developer/git/ExampleIG/template/versions.txt [xslt] Loading stylesheet /Users/preston/Developer/git/ExampleIG/template/scripts/onGenerate.getVersions.xslt onGenerate.r5-schemas: [get] Getting: http://build.fhir.org/fhir-single.xsd [get] To: /Users/preston/Developer/git/ExampleIG/input-cache/schemas/R5/fhir-single.xsd [get] Not modified - so not downloaded [get] Getting: http://build.fhir.org/fhir-xhtml.xsd [get] To: /Users/preston/Developer/git/ExampleIG/input-cache/schemas/R5/fhir-xhtml.xsd [get] Not modified - so not downloaded [get] Getting: http://build.fhir.org/xml.xsd [get] To: /Users/preston/Developer/git/ExampleIG/input-cache/schemas/R5/xml.xsd [get] Not modified - so not downloaded [get] Getting: http://build.fhir.org/xmldsig-core-schema.xsd [get] To: /Users/preston/Developer/git/ExampleIG/input-cache/schemas/R5/xmldsig-core-schema.xsd [get] Not modified - so not downloaded onGenerate.r4-schemas: [get] Getting: http://hl7.org/fhir/R4/fhir-single.xsd [get] To: /Users/preston/Developer/git/ExampleIG/input-cache/schemas/R4/fhir-single.xsd [get] Not modified - so not downloaded [get] Getting: http://hl7.org/fhir/R4/fhir-xhtml.xsd [get] To: /Users/preston/Developer/git/ExampleIG/input-cache/schemas/R4/fhir-xhtml.xsd [get] Not modified - so not downloaded [get] Getting: http://hl7.org/fhir/R4/xml.xsd [get] To: /Users/preston/Developer/git/ExampleIG/input-cache/schemas/R4/xml.xsd [get] Not modified - so not downloaded [get] Getting: http://hl7.org/fhir/R4/xmldsig-core-schema.xsd [get] To: /Users/preston/Developer/git/ExampleIG/input-cache/schemas/R4/xmldsig-core-schema.xsd [get] Not modified - so not downloaded onGenerate.r3-schemas: onGenerate.r2b-schemas: onGenerate.r2-schemas: onGenerate.schemas: onGenerate.data: [xslt] Processing /Users/preston/Developer/git/ExampleIG/template/onGenerate-ig-working.xml to /Users/preston/Developer/git/ExampleIG/temp/pages/_data/artifacts.json [xslt] Loading stylesheet /Users/preston/Developer/git/ExampleIG/template/scripts/onGenerate.data.xslt onGenerate.setup: onGenerate.infoFile: [xslt] Processing /Users/preston/Developer/git/ExampleIG/template/onGenerate-ig-working.xml to /Users/preston/Developer/git/ExampleIG/temp/pages/_data/info.json [xslt] Loading stylesheet /Users/preston/Developer/git/ExampleIG/template/scripts/onGenerate.genJson.xslt onGenerate.processIncludes: [copy] Copying 13 files to /Users/preston/Developer/git/ExampleIG/temp/pages/_includes onGenerate.processIg: [xslt] Processing /Users/preston/Developer/git/ExampleIG/template/onGenerate-ig-working.xml to /Users/preston/Developer/git/ExampleIG/template/onGenerate-ig-working.1.xml [xslt] Loading stylesheet /Users/preston/Developer/git/ExampleIG/template/scripts/onGenerate.group.xslt [xslt] Processing /Users/preston/Developer/git/ExampleIG/template/onGenerate-ig-working.1.xml to /Users/preston/Developer/git/ExampleIG/template/onGenerate-ig-updated.xml [xslt] Loading stylesheet /Users/preston/Developer/git/ExampleIG/template/scripts/onGenerate.final.xslt onGenerate.igQa: [xslt] Processing /Users/preston/Developer/git/ExampleIG/template/onGenerate-ig-updated.xml to /Users/preston/Developer/git/ExampleIG/template/ongenerate-validation-igqa.json [xslt] Loading stylesheet /Users/preston/Developer/git/ExampleIG/template/scripts/onGenerate.qa.xslt onGenerate.artifactList: [xslt] Processing /Users/preston/Developer/git/ExampleIG/template/onGenerate-ig-updated.xml to /Users/preston/Developer/git/ExampleIG/temp/pages/_includes/artifacts.xml [xslt] Loading stylesheet /Users/preston/Developer/git/ExampleIG/template/scripts/createArtifactSummary.xslt check-plantumlfiles: onGenerate.plantUml.ig: onGenerate.plantUml.template: onGenerate.plantUml: onGenerate.copyDataFiles: onGenerate.extend: onGenerate: Generating Summary Outputs (00:14.0156) Sending Usage Stats to Server (00:15.0351) Jekyll: Source: /Users/preston/Developer/git/ExampleIG/temp/pages (00:16.0719) Jekyll: Generating... (00:16.0719) Jekyll has failed. Complete output from running Jekyll: Liquid Exception: Could not locate the included file 'StructureDefinition-MyPatient-summary-table.xhtml' in any of ["/Users/preston/Developer/git/ExampleIG/temp/pages/_includes"]. Ensure it exists in one of those directories and, if it is a symlink, (00:16.0823) Note: Check that Jekyll is installed correctly (00:16.0824) Publishing Content Failed: Process exited with an error: 1 (Exit value: 1) (00:16.0825) (00:16.0825) Use -? to get command line help (00:16.0825) (00:16.0825) Stack Dump (for debugging): (00:16.0826) org.apache.commons.exec.ExecuteException: Process exited with an error: 1 (Exit value: 1) at org.apache.commons.exec.DefaultExecutor.executeInternal(DefaultExecutor.java:404) at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:166) at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:153) at org.hl7.fhir.igtools.publisher.Publisher.runJekyll(Publisher.java:5338) at org.hl7.fhir.igtools.publisher.Publisher.runTool(Publisher.java:5244) at org.hl7.fhir.igtools.publisher.Publisher.generate(Publisher.java:4711) at org.hl7.fhir.igtools.publisher.Publisher.createIg(Publisher.java:858) at org.hl7.fhir.igtools.publisher.Publisher.execute(Publisher.java:707) at org.hl7.fhir.igtools.publisher.Publisher.main(Publisher.java:7756)