##fileformat=VCFv4.2
##ALT=<ID=NON_REF,Description="Represents any possible alternative allele not already represented at this location by REF and ALT">
##FILTER=<ID=LowQual,Description="Low quality">
##FILTER=<ID=VQSRTrancheINDEL99.90to100.00+,Description="Truth sensitivity tranche level for INDEL model at VQS Lod < -70747.6335">
##FILTER=<ID=VQSRTrancheINDEL99.90to100.00,Description="Truth sensitivity tranche level for INDEL model at VQS Lod: -70747.6335 <= x < -5.0033">
##FILTER=<ID=VQSRTrancheSNP99.90to100.00+,Description="Truth sensitivity tranche level for SNP model at VQS Lod < -191360.649">
##FILTER=<ID=VQSRTrancheSNP99.90to100.00,Description="Truth sensitivity tranche level for SNP model at VQS Lod: -191360.649 <= x < -1.7354">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth (reads with MQ=255 or with bad mates are filtered)">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=MIN_DP,Number=1,Type=Integer,Description="Minimum DP observed within the GVCF block">
##FORMAT=<ID=PID,Number=1,Type=String,Description="Physical phasing ID information, where each unique ID within a givensample (but not across samples) connects records within a phasing group">
##FORMAT=<ID=PL,Number=G,Type=Integer,Description="Normalized, Phred-scaled likelihoods for genotypes as defined in theVCF specification">
##FORMAT=<ID=PS,Number=1,Type=Integer,Description="Phasing set (typically the position of the first variant in the set)">
##FORMAT=<ID=RGQ,Number=1,Type=Integer,Description="Unconditional reference genotype confidence, encoded as a phred quality -10*log10 p(genotype call is wrong)">
##FORMAT=<ID=SB,Number=4,Type=Integer,Description="Per-sample component statistics which comprise the Fisher's Exact Test to detect strand bias.">
#INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed">
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
##INFO=<ID=BaseQRankSum,Number=1,Type=Float,Description="Z-score from Wilcoxon rank sum test of Alt Vs. Ref base qualities">
##INFO=<ID=DB,Number=0,Type=Flag,Description="dbSNP Membership">
##INFO=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth; some reads may have been filtered">
##INFO=<ID=END,Number=1,Type=Integer,Description="Stop position of the interval">
##INFO=<ID=ExcessHet,Number=1,Type=Float,Description="Phred-scaled p-value for exact test of excess heterozygosity">
##INFO=<ID=FS,Number=1,Type=Float,Description="Phred-scaled p-value using Fisher's exact test to detect strand bias">
##INFO=<ID=HaplotypeScore,Number=1,Type=Float,Description="Consistency of the site with at most two segregating haplotypes">
##INFO=<ID=InbreedingCoeff,Number=1,Type=Float,Description="Inbreeding coefficient as estimated from the genotype likelihoods per-sample when compared against the Hardy-Weinberg expectation">
##INFO=<ID=MLEAC,Number=A,Type=Integer,Description="Maximum likelihood expectation (MLE) for the allele counts (not necessarily the same as the AC), for each ALT allele, in the same order as listed">
##INFO=<ID=MLEAF,Number=A,Type=Float,Description="Maximum likelihood expectation (MLE) for the allele frequency (not necessarily the same as the AF), for each ALT allele, in the same order as listed">
##INFO=<ID=MQ,Number=1,Type=Float,Description="RMS Mapping Quality">
##INFO=<ID=MQRankSum,Number=1,Type=Float,Description="Z-score From Wilcoxon rank sum test of Alt vs. Ref read mapping qualities">
##INFO=<ID=NEGATIVE_TRAIN_SITE,Number=0,Type=Flag,Description="This variant was used to build the negative training setof bad variants">
##INFO=<ID=POSITIVE_TRAIN_SITE,Number=0,Type=Flag,Description="This variant was used to build the positive training setof good variants">
##INFO=<ID=QD,Number=1,Type=Float,Description="Variant Confidence/Quality by Depth">
##INFO=<ID=RAW_MQandDP,Number=2,Type=Integer,Description="Raw data (sum of squared MQ and total depth) for improved RMSMapping Quality calculation. Incompatible with deprecated RAW_MQ formulation.">
##INFO=<ID=ReadPosRankSum,Number=1,Type=Float,Description="Z-score from Wilcoxon rank sum test of Alt vs. Ref read position bias">
##INFO=<ID=SOR,Number=1,Type=Float,Description="Symmetric Odds Ratio of 2x2 contingency table to detect strand bias">
##INFO=<ID=VQSLOD,Number=1,Type=Float,Description="Log odds of being a true variant versus being false under the trained gaussian mixture model">
##INFO=<ID=culprit,Number=1,Type=String,Description="The annotation which was the worst performing in the Gaussian mixture model, likely the reason why the variant was filtered out">
##contig=<ID=chr1,length=248956422>
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##reference=file:///mnt/ssd/MegaBOLT_scheduler/reference/hg38.fa
##source=HaplotypeCaller
#CHROM  POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  NB6TK329
chr1	67		T	TTGTAGTCTGACCTGTGGTCTGAC		.	PRECISE;SVTYPE=INS;END=68; CIPOS=-7,7;CIEND=-7,7;	GT:CN	1/1:2
chr1	128		T	<DUP:TANDEM>		.	SVTYPE=DUP;END=204;SVLEN=76	GT:CN	./.:5
chr1	916	.	C	<INS:ME:L1>	.	PASS	SVTYPE=INS;END=916;SVLEN=6027;CIPOS=-16,22	GT	0/1
chr1	31163	.	T	<INS>	.	PASS	END=31163;HOMLEN=8;HOMSEQ=CACTCCAC;SVLEN=5;SVTYPE=INS	GT:AD	0/1:1,1
chr1	65100		A	<DUP>		.	SVTYPE=DUP;END=86200;SVLEN=21100	GT:CN	./.:3
chr1	564620		A	<CNV>		.	SVTYPE=CNV;END=232864203	GT:TCN:MCN	./.:2:1
chr1	713519	N	N	<TRA>	5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCGTTTTTTAATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTCTGAGCCCAAGCCATCCATCCTCCCGCCTCGGCGGCGCCAGACATAGTTTTCTATTTTTGACCAACATAAACACTGTGCTGGGTAGATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCT	GT	./.
chr1	740873	.	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=741336;PE=2;MAPQ=57;CT=3to5;CIPOS=-253,253;CIEND=-253,253	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-29.0672,-257.664:10000:PASS:1901:89483:16561:10:100:0:0:0
chr1	749969	0	N	<INS>	.	PASS	IMPRECISE;SVMETHOD=Snifflesv1.0.8;CHR2=1;END=749969;STD_quant_start=23.259407;STD_quant_stop=24.460172;Kurtosis_quant_start=-1.160667;Kurtosis_quant_stop=-1.122461;SVTYPE=INS;SUPTYPE=AL;SVLEN=97;STRANDS=+-;RE=13;AF=0.541667	GT:DR:DV	0/1:11:13
chr1	756295	1	N	<DEL>	.	PASS	PRECISE;SVMETHOD=Snifflesv1.0.8;CHR2=1;END=756329;STD_quant_start=6.745369;STD_quant_stop=6.488451;Kurtosis_quant_start=-0.184405;Kurtosis_quant_stop=-0.417854;SVTYPE=DEL;SUPTYPE=AL;SVLEN=34;STRANDS=+-;RE=11;AF=0.52381	GT:DR:DV	0/1:10:11
chr1	808162	2	N	<DUP>	.	PASS	IMPRECISE;SVMETHOD=Snifflesv1.0.8;CHR2=1;END=808578;STD_quant_start=57.781485;STD_quant_stop=42.262276;Kurtosis_quant_start=-0.895583;Kurtosis_quant_stop=-0.302589;SVTYPE=DUP;SUPTYPE=SR;SVLEN=416;STRANDS=-+;RE=14;AF=0.35	GT:DR:DV	0/1:26:14
chr1	957967		T	TTGTAGTCTGACCTGTGGTCTGAC		.	PRECISE;SVTYPE=INS;CHR2=1;END=957968;PE=0;MAPQ=39;CT=NtoN;CIPOS=-7,7;CIEND=-7,7;INSLEN=23;HOMLEN=6;SR=10;SRQ=1;CONSENSUS=GGACAGGTTGCAGGGGTCGCTGTGCGGGGTCCTTTCGTGCTGTGCCGGAGGCTGCAGCACACGGTGTCTTGTAGTCTGACCTGTGGTCTGACTGTGGTCCAACCTCATTCTCTGCTTCTCCGTCCCTGGCTCCC	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	1/1:-27.5962,-2.70547,0:27:PASS:35312:35776:459:2:0:0:0:9
chr1	963902	.	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=964491;PE=4;MAPQ=37;CT=3to5;CIPOS=-88,88;CIEND=-88,88	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-6.49691,0,-5.09708:51:PASS:19:2:2:0:1:2:0:0
chr1	1114455	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=1114821;PE=2;MAPQ=60;CT=3to5;CIPOS=-93,93;CIEND=-93,93	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-0.621557,-113.799:7:LowQual:1952:24105:5286:7:21:1:0:0
chr1	1325704	.	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=1326099;PE=3;MAPQ=60;CT=3to5;CIPOS=-50,50;CIEND=-50,50	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-27.7142,-653.799:10000:PASS:21673:61502:30471:2:111:1:0:0
chr1	1424173	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=1424611;PE=2;MAPQ=60;CT=3to5;CIPOS=-223,223;CIEND=-223,223	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-39.0451,-836.099:10000:PASS:109:49137:30692:3:141:1:0:0
chr1	1431095		A	<DUP>		.	IMPRECISE;SVTYPE=DUP;CHR2=1;END=1469574;PE=2;MAPQ=37;CT=5to3;CIPOS=-242,242;CIEND=-242,242	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-9.04797,-197.104:90:PASS:2920:3618:767:2:42:1:0:0
chr1	1572787	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=1573142;PE=3;MAPQ=29;CT=3to5;CIPOS=-50,50;CIEND=-50,50	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-57.3655,-1000:10000:PASS:30748:77979:29192:3:214:2:0:0
chr1	1576810	.	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=1577214;PE=2;MAPQ=36;CT=3to5;CIPOS=-154,154;CIEND=-154,154	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-4.01554,0,-8.89427:40:PASS:16932:1094:9239:0:5:2:0:0
chr1	1588574		C	<DUP>		.	IMPRECISE;SVTYPE=DUP;CHR2=1;END=1653973;PE=20;MAPQ=37;CT=5to3;CIPOS=-205,205;CIEND=-205,205	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-30.7639,-897.244:10000:PASS:4154:6052:3408:2:205:9:0:0
chr1	1649680	.	G	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=1650643;PE=3;MAPQ=37;CT=3to5;CIPOS=-11,11;CIEND=-11,11;INSLEN=0;HOMLEN=10;SR=3;SRQ=0.95;CONSENSUS=TAGAGTATTCTCTCTATAGCCATTCTGAACGGTCTGTGACACACGTATGCTTTCAGCTAGAGTTTGCTTTCTCTGGTTTT;CE=1.9208	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-13.8895,0,-13.6994:135:PASS:0:2:192:0:8:2:5:6
chr1	1653943	.	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=1654379;PE=2;MAPQ=37;CT=3to5;CIPOS=-52,52;CIEND=-52,52	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-16.5227,-197.666:10000:PASS:14400:74251:1649:9:55:0:0:0
chr1	1690252	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=1690555;PE=2;MAPQ=60;CT=3to5;CIPOS=-94,94;CIEND=-94,94	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-19.2653,-380.899:10000:PASS:976:18599:13760:3:64:0:0:0
chr1	2286498	.	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=2286935;PE=2;MAPQ=60;CT=3to5;CIPOS=-194,194;CIEND=-194,194	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-20.7699,-407.799:10000:PASS:611:30138:13007:4:69:0:0:0
chr1	2371838		C	<DUP>		.	IMPRECISE;SVTYPE=DUP;CHR2=1;END=2372176;PE=2;MAPQ=23;CT=5to3;CIPOS=-252,252;CIEND=-252,252	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	1/1:-4.59564,-0.597696,0:7:LowQual:533:988:221:3:0:2:0:0
chr1	2411153	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=2411588;PE=2;MAPQ=60;CT=3to5;CIPOS=-225,225;CIEND=-225,225	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-10.2751,-413.799:103:PASS:4535:28938:32058:2:72:2:0:0
chr1	2428046	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=2428504;PE=2;MAPQ=60;CT=3to5;CIPOS=-243,243;CIEND=-243,243	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-20.7911,-517.899:10000:PASS:12976:56659:3654:7:88:1:0:0
chr1	2428613	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=2429047;PE=2;MAPQ=60;CT=3to5;CIPOS=-219,219;CIEND=-219,219	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-2.04015,-212.3:20:PASS:12719:17668:6508:2:37:2:0:0
chr1	2585990	.	N	<DUP>	31.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTGCCCGGACCCGCCCGCACACTCCCAGGCGAGCAGCTGACAGCCTGGAACAGCACCCATACGCCCAGATGAGAATCTGACGGCCTGGAAAAGCACCCTGCACCCCCAGGTGCGCACCTGACAGCCTGGAACAGCACCCACACCCCCAGGCGAGCATCTGACCGGACGGAGCAGCACCCACAACCCCAGGCGGGC	GT	./.
chr1	2591164	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGCAGGGCCCCCACCCCCACGGGAGCCTCCGCCCGTCCCGAGCAGGACCCACACCCCCAGGGGAGCATCCGAACGCCCGGAGCAGGCCCCACCACCCCAGGTGAGCATCCGACAGCCTGGAACAGCACGCTGCCCCCCCAGGTGAGCATCTGACAGCCCGCAGCATCACCCACATGCACAGGTGAGAATCTGAC	GT	./.
chr1	2776029	.	N	<INV>	7	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGGGGGGTAGGGGGAGGGAGGGGGGGGAAGGGGGAGGTAGGGAGGAGGGGTGTGGGAAGGAGAGGGGGACCGGGGAGGTGTACACGCGGAGGGAGGACGGGGGGGGGAGGGGGGGGGAAGGAGGAAGGAAGGAGGGAGGAAGGAGGGAGGAAGGAGGGAGGAAGGAGGGAGGAAGAGGGGGGGAGGGGGGGGGA	GT	./.
chr1	2776125	.	N	<INV>	7	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGGGGGGTAGGGGGAGGGAGGGGGGGGAAGGGGGAGGTAGGGAGGAGGGGTGTGGGAAGGAGAGGGGGACCGGGGAGGTGTACACGCGGAGGGAGGACGGGGGGGGGAGGGGGGGGGAAGGAGGAAGGAAGGAGGGAGGAAGGAGGGAGGAAGGAGGGAGGAAGGAGGGAGGAAGAGGGGGGGAGGGGGGGGGA	GT	./.
chr1	2827694	.	CGTGGATGCGGGGAC	C	.	PASS	SVTYPE=DEL;END=2827708;HOMLEN=1;HOMSEQ=G;SVLEN=-14	GT:GQ	1/1:14
chr1	3319601	.	ACCCTCCTCTGAGTCTTCCTCCCCTTCCCGTG	A	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=3319633;PE=0;MAPQ=29;CT=3to5;CIPOS=-31,31;CIEND=-31,31;INSLEN=0;HOMLEN=56;SR=10;SRQ=0.973451;CONSENSUS=CGGATGTTCCCCAACAAGTACAGGTGCCACGCCCTCCTCTGAGTCTTCCTCCCCTTCCCGTACCCTCCTCTGAGTCTTCCTCCCCTCCCTTCCCCC	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-56.2676,0,-18.1855:10000:PASS:1796:2872:972:2:0:0:9:26
chr1	3545175	.	GTTCTGGGAGCTCCTCCCCC	G	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=3545195;PE=0;MAPQ=29;CT=3to5;CIPOS=-22,22;CIEND=-22,22;INSLEN=0;HOMLEN=22;SR=8;SRQ=1;CONSENSUS=TTCATTAACAACGAGGCGAAACTGGGCTACTCCATGACCAGGGGCAAAATAGGCTTTTAGCCGCTGCGTTCTGGGAGCTCCTCCCCCTCCCCAGAAGGCCAAGG	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	1/1:-101.281,-10.5166,0:105:PASS:375:187:266:1:0:0:0:35
chr1	5220377	N	N	<TRA>	9	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACACATACACATACTAACACATGCACACACTAACACATACACATACACACATACTAACACATACACACACACTAACACATACACATACATATATACTAACATACACATACACACATACTAACACATACACACACACATACACATACACATACAGATATACTAACACATACACATACACACACTCACACACACACC	GT	./.
chr1	5220391	N	N	<TRA>	4.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTAACACATACACATACACACATACTAACACATACACACACACTAACACATACACATACATATATACAAACATACACATACACACATACAAACACATACACACACACATACACATACACATACAGATATACTAACACATACACACACACACATACTAACACATACACATACACACATACTAACACATACACATAC	GT	./.
chr1	6142121	.	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=6142626;PE=2;MAPQ=60;CT=3to5;CIPOS=-252,252;CIEND=-252,252	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-10.1938,0,-22.1938:102:PASS:0:68:3:45:4:2:0:0
chr1	6181115	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=6181627;PE=2;MAPQ=60;CT=3to5;CIPOS=-247,247;CIEND=-247,247	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-22.5767,-446.899:10000:PASS:0:223:104:4:75:0:0:0
chr1	6246502	.	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=6247017;PE=2;MAPQ=29;CT=3to5;CIPOS=-227,227;CIEND=-227,227	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-5.41098,-69.7924:54:PASS:0:400:24:33:18:0:0:0
chr1	6712757	.	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=6713071;PE=2;MAPQ=60;CT=3to5;CIPOS=-67,67;CIEND=-67,67	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-7.22471,-144:72:PASS:1290:23423:2413:13:24:0:0:0
chr1	7870589	.	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=7871100;PE=2;MAPQ=60;CT=3to5;CIPOS=-253,253;CIEND=-253,253	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-12.6427,-248.899:126:PASS:42:110:1:5:42:0:0:0
chr1	7886719	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=7887031;PE=2;MAPQ=60;CT=3to5;CIPOS=-105,105;CIEND=-105,105	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-7.86686,-365.799:79:PASS:24737:10565:5829:1:64:2:0:0
chr1	7912843	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=7913317;PE=2;MAPQ=60;CT=3to5;CIPOS=-252,252;CIEND=-252,252	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-15.3525,-306:154:PASS:3476:58699:28500:4:51:0:0:0
chr1	9073628	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=9074015;PE=2;MAPQ=37;CT=3to5;CIPOS=-55,55;CIEND=-55,55	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-0.12574,-130.6:4:LowQual:5101:7219:438:3:23:2:0:0
chr1	10211546	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=10211987;PE=2;MAPQ=60;CT=3to5;CIPOS=-207,207;CIEND=-207,207	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-22.8777,-452.899:10000:PASS:34047:22538:0:1:76:0:0:0
chr1	10401972	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=10402405;PE=2;MAPQ=60;CT=3to5;CIPOS=-221,221;CIEND=-221,221	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-4.19382,0,-28.1938:42:PASS:444:15964:854:25:5:1:0:0
chr1	10477130	.	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=10477585;PE=3;MAPQ=60;CT=3to5;CIPOS=-140,140;CIEND=-140,140	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-10.77,-385.8:108:PASS:11344:38256:2716:5:66:2:0:0
chr1	10511064	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=10511392;PE=2;MAPQ=60;CT=3to5;CIPOS=-108,108;CIEND=-108,108	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-15.653,-308.899:157:PASS:77:9309:29590:1:52:0:0:0
chr1	11073973		C	<DEL>		.	IMPRECISE;SVTYPE=DEL;CHR2=1;END=11074329;PE=2;MAPQ=60;CT=3to5;CIPOS=-89,89;CIEND=-89,89	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-15.9535,-311.799:10000:PASS:20342:15694:497:2:53:0:0:0
chr1	11302822		T	<DEL>		.	IMPRECISE;SVTYPE=DEL;CHR2=1;END=11303318;PE=2;MAPQ=60;CT=3to5;CIPOS=-205,205;CIEND=-205,205	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-13.5458,-266.899:135:PASS:415:18448:9446:4:45:0:0:0
chr1	11575479	.	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=11575942;PE=2;MAPQ=60;CT=3to5;CIPOS=-253,253;CIEND=-253,253	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-22.2751,-437.799:10000:PASS:19358:22750:12660:1:74:0:0:0
chr1	11982515	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=11983003;PE=2;MAPQ=60;CT=3to5;CIPOS=-253,253;CIEND=-253,253	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-15.3923,-250.926:154:PASS:2898:72015:37877:4:63:1:0:0
chr1	12061745	.	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=12062203;PE=2;MAPQ=60;CT=3to5;CIPOS=-210,210;CIEND=-210,210	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-25.2859,-500.899:10000:PASS:18576:77143:7090:6:84:0:0:0
chr1	12373783	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=12374283;PE=2;MAPQ=60;CT=3to5;CIPOS=-80,80;CIEND=-80,80	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-5.74015,-222:57:PASS:140:10028:22044:1:38:1:0:0
chr1	12408539	.	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=12408972;PE=2;MAPQ=60;CT=3to5;CIPOS=-174,174;CIEND=-174,174	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-6.34221,-234:63:PASS:243:13719:18560:1:40:1:0:0
chr1	12422350	.	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=12422853;PE=2;MAPQ=60;CT=3to5;CIPOS=-252,252;CIEND=-252,252	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-1.76554,0,-178.665:18:PASS:0:36:82:1:32:2:0:0
chr1	12431934	N	N	<TRA>	4	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGCATTTATCAGTACATTTTTCCTTTTCGTGGCGAAATAATATTCCATTGTATGTCTATACCACCCTTTGCATATACGTTCATCCACTGATGGACATTTGGGCTGCTTCCACCATTTGGCTGTTGTAAACAGTGTTGCTATGAACATGCATGTACAAGTATTTGTTCGAGTCCTTGTTTGCACTTCTTTTGGGTG	GT	./.
chr1	12704580	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=12705018;PE=2;MAPQ=60;CT=3to5;CIPOS=-106,106;CIEND=-106,106	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-2.42883,-156:24:PASS:4857:22108:123:9:27:1:0:0
chr1	12835982	.	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=12836287;PE=2;MAPQ=60;CT=3to5;CIPOS=-100,100;CIEND=-100,100	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-59.9444,-1000:10000:PASS:47920:121372:4565:5:237:2:0:0
chr1	12854142	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=12919546;PE=6;MAPQ=20;CT=3to5;CIPOS=-191,191;CIEND=-191,191	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-20.791,-365.208:10000:PASS:2445:5905:2231:3:93:4:0:0
chr1	12855834	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=13198700;PE=9;MAPQ=18;CT=3to5;CIPOS=-215,215;CIEND=-215,215	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-29.0815,-311.763:10000:PASS:6067:13984:1993:3:130:5:0:0
chr1	12855840		A	<DUP>		.	IMPRECISE;SVTYPE=DUP;CHR2=1;END=13198807;PE=6;MAPQ=18;CT=5to3;CIPOS=-230,230;CIEND=-230,230	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-36.1308,-316.705:10000:PASS:6069:14073:1993:3:139:3:0:0
chr1	12855845	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=12856334;PE=2;MAPQ=57;CT=3to5;CIPOS=-50,50;CIEND=-50,50	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-17.1011,-225.228:10000:PASS:33126:127499:2389:7:70:1:0:0
chr1	12855952	.	C	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=13448205;PE=12;MAPQ=23;CT=5to5;CIPOS=-325,325;CIEND=-325,325	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-24.9591,-266.935:10000:PASS:7617:15380:2614:3:127:6:0:0
chr1	12898651	.	A	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=13414157;PE=2;MAPQ=25;CT=3to3;CIPOS=-345,345;CIEND=-345,345	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-11.7936,-108.345:118:PASS:8735:13001:2393:2:48:1:0:0
chr1	12898674	.	G	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=13353937;PE=2;MAPQ=20;CT=3to3;CIPOS=-343,343;CIEND=-343,343	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-11.7379,-100.696:117:PASS:8646:12516:2152:2:46:1:0:0
chr1	12907780		A	<DUP>		.	IMPRECISE;SVTYPE=DUP;END=13183572	GT:CN	0/1:2
chr1	13172116	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=13172457;PE=2;MAPQ=37;CT=3to5;CIPOS=-50,50;CIEND=-50,50	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-45.8287,-509.74:10000:PASS:48105:60351:4415:2:183:3:0:0
chr1	13353831		G	<DUP>		.	IMPRECISE;SVTYPE=DUP;CHR2=1;END=13634820;PE=3;MAPQ=18;CT=5to3;CIPOS=-236,236;CIEND=-236,236	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-5.79695,-30.9753:58:PASS:7090:1472:1825:0:21:0:0:0
chr1	13353949	.	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=13414046;PE=3;MAPQ=18;CT=3to5;CIPOS=-238,238;CIEND=-238,238	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-17.158,-118.097:10000:PASS:622:405:113:1:71:2:0:0
chr1	13882179	.	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=13882491;PE=2;MAPQ=60;CT=3to5;CIPOS=-55,55;CIEND=-55,55	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-9.6324,-188.899:96:PASS:6825:7992:36:2:32:0:0:0
chr1	14099641	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=14100124;PE=2;MAPQ=60;CT=3to5;CIPOS=-209,209;CIEND=-209,209	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-36.4452,-834:10000:PASS:33978:34275:137:2:140:1:0:0
chr1	14355403	.	A	<DEL>	.	PASS	END=14355430;HOMLEN=5;HOMSEQ=TTGTG;SVLEN=-27;SVTYPE=DEL	GT:AD	0/1:1,1
chr1	15439083		A	AAGGTCTTTTTTTTCTTCTCCCAGCGGC		.	PRECISE;SVTYPE=INS;CHR2=1;END=15439084;PE=0;MAPQ=29;CT=NtoN;CIPOS=-15,15;CIEND=-15,15;INSLEN=27;HOMLEN=14;SR=10;SRQ=1;CONSENSUS=TGGCCGGGTAAGTCTCTCAATGGATTTACCTGTGAGTCCTGCAGACCCGGGAAAGGTCTTTTTTTTCTTCTCCCAGCGGCAGGTCTTTTTTTCTCCTCCCGGGAGCTCTGTGGCTCCTGTG;CE=1.	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-70.0537,0,-35.7967:10000:PASS:26760:32263:5414:2:0:0:16:30
chr1	15518745		T	TAGCGTAAGTACACGGGTGG		.	PRECISE;SVTYPE=INS;CHR2=1;END=15518746;PE=0;MAPQ=29;CT=NtoN;CIPOS=-3,3;CIEND=-3,3;INSLEN=19;HOMLEN=2;SR=9;SRQ=0.992908;CONSENSUS=CGGCTGCAAAGATTTCTTCATTTTCAGGGGTTGTAAGAGATCTTTCTAAATCCAGAAAATCTGGTGGTCTTTCACTTAGCGTAAGTACACGGGTGGAGTTTTTAGCACCAGGGGTTTGAAGGGAGT	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-27.286,0,-2.65878:27:PASS:9284:14050:4758:2:0:0:2:12
chr1	16360078	.	C	<DEL>	.	PASS	PRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=16383337;PE=2;MAPQ=37;CT=3to5;CIPOS=-44,44;CIEND=-44,44;INSLEN=0;HOMLEN=42;SR=10;SRQ=1;CONSENSUS=AACCTTAGGGGACTAAAAATGCTGGAGCCCCCCTCACAACCTCCTCTACATCCCCCCCCACCTCCACCCCCTTTCTCTGTTCTAGATGAAGAAAGCAATTTC	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-211.818,0,-7.82146:78:PASS:2611:3465:1466:2:171:1:14:91
chr1	16363128	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=16386314;PE=2;MAPQ=37;CT=3to5;CIPOS=-253,253;CIEND=-253,253	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-10.2272,-158.192:102:PASS:3097:3676:481:2:34:0:0:0
chr1	16366210	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=16388648;PE=2;MAPQ=37;CT=3to5;CIPOS=-247,247;CIEND=-247,247	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-5.87825,-123.845:59:PASS:2331:3592:378:3:31:1:0:0
chr1	16366942	.	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=16389401;PE=2;MAPQ=37;CT=3to5;CIPOS=-231,231;CIEND=-231,231	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-3.09794,0,-5.39803:31:PASS:2374:3728:104:3:1:1:0:0
chr1	16451658	.	C	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=16452057;PE=2;MAPQ=60;CT=3to5;CIPOS=-159,159;CIEND=-159,159	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-12.3417,-242.899:123:PASS:5967:21606:306:7:41:0:0:0
chr1	16717825	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=16718146;PE=2;MAPQ=60;CT=3to5;CIPOS=-50,50;CIEND=-50,50	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-22.8777,-452.899:10000:PASS:11438:38448:1216:6:76:0:0:0
chr1	16757705	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=16758030;PE=2;MAPQ=60;CT=3to5;CIPOS=-75,75;CIEND=-75,75	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-9.03089,-180:90:PASS:4365:21075:748:8:30:0:0:0
chr1	16774675	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=16775036;PE=2;MAPQ=60;CT=3to5;CIPOS=-129,129;CIEND=-129,129	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-6.94427,-246:69:PASS:43504:7039:171:0:42:1:0:0
chr1	16812983		G	<DUP>		.	PRECISE;SVTYPE=DUP;CHR2=1;END=16959697;PE=10;MAPQ=23;CT=5to3;CIPOS=-44,44;CIEND=-44,44;INSLEN=0;HOMLEN=54;SR=7;SRQ=1;CONSENSUS=GCCTTGTCCAGGTCGCTTTGCATCTGCTGCTGGGACAGGTCCTTCTCGTGGAGCACCTTGTCCCGCAGCTGCTCCTCCAGCTGGGCCTGCAGCAGGGCCTGCTTCTC;CE=1.87393	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-29.6144,0,-15.3507:154:PASS:2247:13805:11382:2:63:5:8:16
chr1	16890344	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=16890657;PE=2;MAPQ=53;CT=3to5;CIPOS=-64,64;CIEND=-64,64	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-61.016,-955.306:10000:PASS:8102:177150:32711:9:204:0:0:0
chr1	16890824		A	<DUP>		.	PRECISE;SVTYPE=DUP;CHR2=1;END=16893974;PE=12;MAPQ=17;CT=5to3;CIPOS=-27,27;CIEND=-27,27;INSLEN=0;HOMLEN=28;SR=6;SRQ=0.990476;CONSENSUS=AAAAGGATAGATCCATTAATGAGGTAACAAATTATTGCCTTTATGTTGGGATAGAAAAGGGCCAGGTAGAAAACAATGAAAGAGAAAGACAGAGAGACAGAGACA;CE=1.80735	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-0.373383,-28.5073:5:LowQual:1076:895:59:2:26:8:11:3
chr1	16895287	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=16895702;PE=2;MAPQ=29;CT=3to5;CIPOS=-189,189;CIEND=-189,189	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-23.6674,-169.966:10000:PASS:1818:76218:15938:9:94:1:0:0
chr1	16945606	.	G	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=17278422;PE=2;MAPQ=37;CT=3to3;CIPOS=-165,165;CIEND=-165,165	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-61.3919,-747.474:10000:PASS:10713:25020:8480:3:213:1:0:0
chr1	16948257	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=16948822;PE=2;MAPQ=37;CT=3to5;CIPOS=-245,245;CIEND=-245,245	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-11.1034,-183.165:111:PASS:5:783:46:31:37:0:0:0
chr1	16950544	.	G	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=17275195;PE=3;MAPQ=37;CT=5to5;CIPOS=-328,328;CIEND=-328,328	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-26.6698,-518.766:10000:PASS:12072:23046:8903:2:100:1:0:0
chr1	16953479	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=16953865;PE=2;MAPQ=46;CT=3to5;CIPOS=-105,105;CIEND=-105,105	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-41.4144,-643.372:10000:PASS:2185:108817:22832:9:138:0:0:0
chr1	16953773	.	A	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=17271865;PE=7;MAPQ=37;CT=5to5;CIPOS=-283,283;CIEND=-283,283	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-69.4868,-1000:10000:PASS:12637:21898:9428:2:277:4:0:0
chr1	16972877	.	A	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=16973261;PE=2;MAPQ=29;CT=3to5;CIPOS=-84,84;CIEND=-84,84	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-52.6128,-887.833:10000:PASS:27259:99076:16382:5:175:0:0:0
chr1	16974293	.	C	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=17085880;PE=7;MAPQ=37;CT=5to5;CIPOS=-105,105;CIEND=-105,105	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-46.6614,-615.163:10000:PASS:8741:12122:356:3:193:4:0:0
chr1	16974534	.	G	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=17086092;PE=43;MAPQ=23;CT=3to3;CIPOS=-205,205;CIEND=-205,205	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-8.83562,0,-649.055:88:PASS:9189:11746:356:2:148:21:0:0
chr1	17084365	.	G	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=17084691;PE=3;MAPQ=36;CT=3to5;CIPOS=-50,50;CIEND=-50,50	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-80.5479,-1000:10000:PASS:83126:112062:40797:2:317:3:0:0
chr1	17326344	.	T	<DEL>	.	PASS	IMPRECISE;SVTYPE=DEL;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=1;END=17326756;PE=2;MAPQ=60;CT=3to5;CIPOS=-144,144;CIEND=-144,144	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-1.48565,0,-73.2846:15:PASS:608:16270:19239:2:14:1:0:0
chr1	17684750		A	<DEL>		.	IMPRECISE;SVTYPE=DEL;CHR2=1;END=17685293;PE=2;MAPQ=60;CT=3to5;CIPOS=-150,150;CIEND=-150,150	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-0.670752,0,-149.669:8:LowQual:0:0:152:0:28:2:0:0
chr1	17707276		A	<DEL>		.	IMPRECISE;SVTYPE=DEL;CHR2=1;END=17707646;PE=2;MAPQ=60;CT=3to5;CIPOS=-169,169;CIEND=-169,169	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-9.35032,-281.598:94:PASS:624:14284:10510:3:50:1:0:0
chr1	17746929		T	<DEL>		.	IMPRECISE;SVTYPE=DEL;CHR2=1;END=17747387;PE=2;MAPQ=60;CT=3to5;CIPOS=-50,50;CIEND=-50,50	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-21.9746,-434.899:10000:PASS:348:69322:10617:13:73:0:0:0
chr1	23389704	N	N	<TRA>	8	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACACACACACGCAACCACAACACCTGCACACACCCACTCACACACAGACACACACACACCCCGCACACACACACACACACACACACACACATACACACACACCCACCCCACACACACACACACATACACACTCACATACAGACACAACCACACCACACTCACACACACACATACACACTCACATACAGACACAAC	GT	./.
chr1	23389748	N	N	<TRA>	8	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACACACACACGCAACCACAACACCTGCACACACCCACTCACACACAGACACACACACACCCCGCACACACACACACACACACACACACACATACACACACACCCACCCCACACACACACACACATACACACTCACATACAGACACAACCACACCACACTCACACACACACATACACACTCACATACAGACACAAC	GT	./.
chr1	25075555	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGGTCACCCGCCAACACATCCTACTAATTTTTTGTGTTTTTAGTAGAAATGCGGTGTCGCCATGCGGCCCAGGCTGGTCTTGAACACCTGACCTCATGATCCACCTGCCTCCACGGCTGAAAGTGCTGGGATTACAGACTTGATCAACCGCGCCCAGCCAAATATCTTCTTTTGAAAAGAGTCTGTTTATATTCT	GT	./.
chr1	28193228	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGTGGTACTGTATTAGGGAAGTCATAGCAAAGCGTTACAGCCTATTAGGACACAGATAAGATGTTCCCTGTAGCGGCTGGGCGCGGTGGCTTACACCTGTAATCCTAGCACTTTCGGAGGCCGAGGCGAGTGGATCACGAGGTCAGGAGATCGAGACCATCCTAGCTAACACGGTGAAACTCTGTCTCTACTAAA	GT	./.
chr1	28884596	N	N	<TRA>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCGCCCAGGCTGGAGTGCAGTGGAATGATCTCGGCTCACTGCAACCTCCACCTCCCAAATTCAAGCAGTTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGTCATGTGCCACCATGCCTGGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTGAGTCTCGCTCTGTCACCCAGGCTTGGGTGCAGTGGCAC	GT	./.
chr1	33154837	N	N	<TRA>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTGAGCCGTTGTCCTTGCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGTGAGTCACTGTCACCCAGGCTGGATTGCAGTGGCACAATCTCAGCTCACTGCAACCTCTGCTGCCCAGGTTCAAGCTATTCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCTACCACCATGCCTGG	GT	./.
chr1	35034657	.	G	GT	.	PASS	END=35034657;HOMLEN=6;HOMSEQ=TTTTTT;SVLEN=1;SVTYPE=INS	GT:AD	0/1:1,1
chr1	37259413	N	N	<TRA>	9	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGTGGATGGTTGGGTGGATGGTGGGGTGGGGGGGGGGATGGATGGGTGGATGGATACATGGATGCGTGGGTGGGTGAAATGATGAATGGGTGGGTGGATGGATGGATGGGTGGATGGATGGGTGAATGGATGGATGGAGGATGAGTGGGTG	GT	./.
chr1	42010331	N	N	<TRA>	36.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTCTGGCTCTCATGGTTGAAGATGTTGCTAGTGAGAGAACTATTCTCTAGGGCATGGAATAACTGGACAGGGAGGGGGATGTCTCTCCACAGCAAACCCTCACCATAGGCCCCAGTGAAGCACCACGACCACCTCTACCACCATCACTACCATCACCACCACCATCACCACCACCACCATCAGCACCACGACCAG	GT	./.
chr1	42010492	N	N	<TRA>	30	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCACCACCACCACCACTATAACCACCATCATCATCACCACCACTACCACTACTATAACCATCACCACCATCACTGCTATAACCACCACCACCACCACTATAACCATCACCACCATCACCACTATAACCACCACTACCACCACCACCACTATAACCACCACCACCACCACTATAACCACCATCATCACCACCACCA	GT	./.
chr1	49056788	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTCTGTGTGTCTGTGTGTGTCTGTGTGTGTCTGTGTGTCTGTGGGGGAGTGTGTGTGTGTGGGTGTGTGTG	GT	./.
chr1	50536138	N	N	<TRA>	3	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGGGAGAGGAGATTGTGCCACGGCACCCCAGACAGAGAAAAAAAAGGAAAACCCCGTCAAAAAAAAAAAAAAAAAAAAAAAAAGCTAAAGCCAGGCGCAGTGGCTAAAGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCATGAGGTCAGGAGTTCGAGACCAGGCTGACCAAAATGGTGAAACC	GT	./.
chr1	61027526	.	G	<DUP:TANDEM>	.	PASS	END=61027590;HOMLEN=0;SVLEN=64;SVTYPE=DUP:TANDEM;NTLEN=0	GT:AD	0/1:2,1
chr1	70167411	.	A	.	.	PASS	IMPRECISE;SVTYPE=DEL;END=70167700;CIPOS=-500,500;CIEND=-500,500	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	1/0:0,-42.2388,-559.671:10000:PASS:44718:93308:40707:2:0:0:161:2
chr1	70167412	.	A	.	.	PASS	PRECISE;SVTYPE=DEL;END=70167700;CIPOS=-500,500;CIEND=-500,500	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	1/0:0,-42.2388,-559.671:10000:PASS:44718:93308:40707:2:0:0:161:2
chr1	70167414		TTAGCTGGGCATGGTGGCAGGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAATTCCTTGAACCTGGGAGGCGGAGGATGCAGTGAGCTGAGATTGCACCACTGCACTCCAGGCTGGGTGACAGAATGAGACTCTGTCTGAAAACAAAAACAAAAACAAAAAATAATAATAATTTAAGGCCTCTGAAAAGGATTCTATTTCTATTTATTTTGAGATGGAGTCTTGCTCTGAGTTGCCCAGGCTGGAGTG	T		.	PRECISE;SVTYPE=DEL;CHR2=chr1;END=70167743;PE=0;MAPQ=70;CT=3to5;CIPOS=-10,10;CIEND=-10,10;INSLEN=0;HOMLEN=10;SR=10;SRQ=0.99422;CONSENSUS=AACCCCATCTATACTAAAAATACAAAAAAAATTAGCTGGGACTACAGGTGTGTGCCACCACTCCCGGCTAATTTTTGTGTTTTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCTG	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-42.2388,-559.671:10000:PASS:44718:93308:40707:2:0:0:161:2
chr1	70302428		TTAAAAGAAAATAGTATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCC	T		.	PRECISE;SVTYPE=DEL;CHR2=chr1;END=70302752;PE=0;MAPQ=70;CT=3to5;CIPOS=-17,17;CIEND=-17,17;INSLEN=0;HOMLEN=16;SR=10;SRQ=1;CONSENSUS=TGCTTTATAGCTGAATTCTAGCTTTTAGTCCACTCCCAGAAGCTAGAATTCAGCTTTACTATTAAATAACACCTATCATTGCTTGAGCATGTGTCCTAAAAGAAAATAGTATTAAAAGGGACTCT	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-219.502,0,-133.992:10000:PASS:30541:23251:34236:1:0:0:52:72
chr1	70331516	.	A	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=chr1;END=70332622;PE=2;MAPQ=70;CT=5to5;CIPOS=-807,807;CIEND=-807,807	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-101.294,-1000:10000:PASS:591:1034:597:2:381:2:0:0
chr1	70339812		TTTATTATTATTATTATTA	T		.	PRECISE;SVTYPE=DEL;CHR2=chr1;END=70339831;PE=0;MAPQ=70;CT=3to5;CIPOS=-37,37;CIEND=-37,37;INSLEN=0;HOMLEN=36;SR=10;SRQ=1;CONSENSUS=TATCCGCTAATGATATACGATGACATTTGAATTTATACTGATGTAACACTTCTGATTCCTAATATCTGTTATTTGTGCCTTCTTTTTCTCTTGATCAGTACGTTTATTATTATTATTATTATTAT	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-391.527,0,-164.962:10000:PASS:2465:3318:2137:1:0:0:61:125
chr1	70363610		CCCCCTCCACTGTTAACAGCCATAAACCCCACATTCAGCCAGTCACAAAATCTTGACCTTTCTACCTACTGCAGAGCTCTAAAATGGAACTCTTTCTCTTGATTTTTCCACTGCCGATGAAGAGTCAAACTCTGTCAAATATTTGAAGAGATTTCTTCTGAATCAAATATGAGG	C		.	PRECISE;SVTYPE=DEL;CHR2=chr1;END=70363784;PE=0;MAPQ=70;CT=3to5;CIPOS=-2,2;CIEND=-2,2;INSLEN=0;HOMLEN=1;SR=10;SRQ=0.95;CONSENSUS=ATATGAGTGACCATGGCCTGTGACACAGCCCTCAGGAGGTCCTGAGAACATGTGCCCCAGGTAGTCGGGTGCAGCTTAGTTTTATACATTTTAGGGAGGCACGAGACATTAACCAAACACATTTAAG	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-383.175,0,-444.358:10000:PASS:20155:47302:24928:2:0:0:154:133
chr1	70384416	.	A	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=chr1;END=70385278;PE=2;MAPQ=70;CT=5to5;CIPOS=-524,524;CIEND=-524,524	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-105.132,-1000:10000:PASS:481:881:429:2:416:3:0:0
chr1	70391323	.	T	<INV>	.	PASS	IMPRECISE;SVTYPE=INV;SVMETHOD=EMBL.DELLYv0.7.8;CHR2=chr1;END=70391466;PE=2;MAPQ=70;CT=5to5;CIPOS=-50,50;CIEND=-50,50	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-124.397,-1000:10000:PASS:25306:48167:19227:2:480:3:0:0
chr1	70446305		G	<DUP>		.	PRECISE;SVTYPE=DUP;CHR2=chr1;END=70446758;PE=9;MAPQ=70;CT=5to3;CIPOS=-2,2;CIEND=-2,2;INSLEN=0;HOMLEN=1;SR=10;SRQ=0.95814;CONSENSUS=TCTTATTCACTTGTGACTTGAACCTGAAAATGTGTGATGTGGAGCTGCTATATCTATCTCACCACCACAAGAAGAACTTCTATCTGAGAATGAAACCCCATGGGCCGGGCGCGGTGGCTCACGC	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:-37.166,0,-311.031:10000:PASS:54140:70681:33689:2:126:9:104:25
chr1	70480202		A	<DEL>		.	IMPRECISE;SVTYPE=DEL;CHR2=chr1;END=70480856;PE=3;MAPQ=70;CT=3to5;CIPOS=-211,211;CIEND=-211,211	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	0/1:0,-42.742,-1000:10000:PASS:366:317:299:1:231:4:0:0
chr1	70480506		TATGGTTATGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTTTTTTTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCG	T		.	PRECISE;SVTYPE=DEL;CHR2=chr1;END=70480838;PE=0;MAPQ=70;CT=3to5;CIPOS=-17,17;CIEND=-17,17;INSLEN=0;HOMLEN=16;SR=10;SRQ=1;CONSENSUS=TAGTGGCTGTATAAGAGAGTGGAGACTTAAAAAACAAATCATGATTGAATAAAGACATTGTTTTTAATTTTTTTTGTGATAGTGGTATTATGGTTATGTTTTCTTAAGTGAGCCTTTATCGTTTA	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	1/1:-513.021,-44.7743,0:10000:PASS:40006:2134:39943:0:0:0:0:149
chr1	70624672		TTGTATATATATATACTTTATATATATACATATGTGTG	T		.	PRECISE;SVTYPE=DEL;CHR2=chr1;END=70624710;PE=0;MAPQ=70;CT=3to5;CIPOS=-2,2;CIEND=-2,2;INSLEN=0;HOMLEN=0;SR=5;SRQ=1;CONSENSUS=TAATAGAGAATAAAATAGTATATCCTTTAAGGTTATTGTGGGAATGAAATTAGATAAGTAAAGTGTTTAGCATTACTGTTAATAATAACTCAGTAATTATGTAGTTGTATATATATATACTTTATATATAT	GT:GL:GQ:FT:RCL:RC:RCR:CN:DR:DV:RR:RV	1/1:-1000,-69.8995,0:10000:PASS:5448:8186:5056:2:0:0:19:440
chr1	72034546	N	N	<TRA>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGGGAGGATTGCTTGAGCCCAGTAGGAGAGAGAGGTTTCAGTTAGCCGAGATTGTGCTACTAGCCTGGGGGACAGAGTGAGATCCTGTCTCAAGAAAAAAAAAAATAGATATACGTAAACACACACACACACACACACACACACACACACATATGTATACATATATACACATACACACATACATATAAAACATAA	GT	./.
chr1	87337011	N	N	<TRA>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAACTTTGTAAAATATTTAAAGAGATTTATTCTGAGCTAAATGTAAGGACCATGATCTGTGACACAACCTCAAGAGGTCCTGAGAACATGTGCCCAAGGTGGTTGGGTGACAGCCTGGTTTTATATGTTTTAGGGAGACATAAGATATCAATCAGTACATGTGAGGTACATATTGGTTTGGTCTGGAAAGGCAAG	GT	./.
chr1	88473124	N	N	<TRA>	12.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GACAATAAAACAATCTTTTTTATTTTTATTTTTTAGTGACAGGGTCTCACTCCGTTACCCAGGCTGGAGTGCAGTGGTGCAATCATAGCTTACGGTAGCCTTGAACTCCTGGGCTCCAGTGATCCTCCCACCTCAGTCTCCTGAGTGGCTAAAACTACAGGTGC;SVTYPE=TRA;CHR2=4;END=6257278;	GT	./.
chr1	88473177	N	N	<TRA>	12.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GACAATAAAACAATCTTTTTTATTTTTATTTTTTAGTGACAGGGTCTCACTCCGTTACCCAGGCTGGAGTGCAGTGGTGCAATCATAGCTTACGGTAGCCTTGAACTCCTGGGCTCCAGTGATCCTCCCACCTCAGTCTCCTGAGTGGCTAAAACTACAGGTGC;SVTYPE=TRA;CHR2=4;END=6257278;	GT	./.
chr1	97692910	N	N	<TRA>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AATCCCAGCTCTACTCGGGAGGCTGAGGCAGGAAAATGGCTTGAATCTGGGAGGTGGAGATTGCAGTGAGCCGAGATCGTGCCACGGCCACTGCGCTCCAGCCTGGCAACAGAGTGAGACTCTTATCTCAAAAAAAAAAAAAAAAAAAAAATCGGGACCAGGTTAATTTTGAAAACAGGAGACTTTGAGTAAAGC	GT	./.
chr1	109764613	N	N	<TRA>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTTCTGTCACCTAGCCTGGAGTGCAGTGGAATGATCTTGGCTCACTGCAGTCTCTGCCTCCCAAGTAGCTGGGAGTACAGGCACACACCACCATGCTCAGCTAATTTTTTTTTTTGTGTGCATATATATATATATATATATGTTTTTTTTTGAGACAGGGTCTCACTGTATCACCCAGGAGGAGTGCAGTGGCTC	GT	./.
chr1	119964075	N	N	<TRA>	37	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATATATGTGTATATATATGTATATATATATATGTATATATATGTATATATATATATGTATATATATATATTTACACACACACACACACACAGAGGTCATAATTGGATTCCATATAATAATGATATCAATATGTCTATCAGTATTGGAGTTGGATTCTGGTACTTTCTCATGTGGGG;SVTYPE=TRA;CHR2=11	GT	./.
chr1	121351907	.	N	<DEL>	16	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGCGTTCTTTTTCTCCACTTGCAGATCCTCCGGAACGAGTGTTTCTCCCTGAACTCACCAGTGAAGTTTCAACTCTGGGAGTTGAATGCCAACGTCACGAAGAAGTTTCTGAGAATGCTTCTGTTTAGTTATGTGAGGTTTATCCCGTTTCCAAGGAAATCCTCAGAGAAGGCCAAACACCCAATGGCAAATTCT	GT	./.
chr1	121356053	.	N	<DEL>	1.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTTGAAAGGAATCATCAAAATGTAGTTTCGGAGAATGCTTTCATCTAGATTTTTGAGTAGATAGTTGATTTTCCACCACAGGCCTCGAAACCCTCCAAATGTCCACTTGCAGACTCTAGAAAGAGAGGGTTTCAAAGCTGCTCTATCAAAAGGAAAGTACAACTCTGGGAGTTGAATGCAAGCCTCACAAAGAAG	GT	./.
chr1	121356189	.	N	<DEL>	1.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTTGAAAGGAATCATCAAAATGTAGTTTCGGAGAATGCTTTCATCTAGATTTTTGAGTAGATAGTTGATTTTCCACCACAGGCCTCGAAACCCTCCAAATGTCCACTTGCAGACTCTAGAAAGAGAGGGTTTCAAAGCTGCTCTATCAAAAGGAAAGTACAACTCTGGGAGTTGAATGCAAGCCTCACAAAGAAG	GT	./.
chr1	144038447	.	N	<INV>	7	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGGTTCTATTGTACTTAAGCATTTATACAAACATTAGCTCCCTTAATCATCATAGTTGTAAATGGGACAAATCTTTTTTTTTTTTTTTTTTTGGGGTTTTTTTTTTTTTTTAATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCC	GT	./.
chr1	144038448	.	N	<INV>	6	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TAATTTTACAATAAATTATGGTTCTATTGTACTAAAGCATTTATACAAACATTAGCTCCCTTAATCATCATAGTTGTAAATGGGACAAATCTTTTTTTTTTTTTTTTTTTTTGTGGTTTTTTTTTTTTTTAATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCC	GT	./.
chr1	148850702	N	N	<TRA>	30	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCCATTTCATCACATTTCATCATTTCATCATTTCACTTCATCTCATCATATCTTCTTTCATTGCATTATTTCATTTCATCTCATCATTTCATTTCATCATTTCACTTCATCTCATCATTTCATCACATCATTTCATTTCATCTCATCATTTCATTTCATTCTTTCATCATTTCATCTCAACATTTCATTTCATC	GT	./.
chr1	152797833	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACATATATATGTACATACATATATGCACACATATATATGTACATACATATATGCACACATATATATGTACATACATATATGCACACATATATATGTACATACATATATGCACACATATATATGTACATACATCTATGCACACATATATATGCACACACATATATGCACCCATATATATGTACATACATATATGCA	GT	./.
chr1	152797885	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACATATATATGTACATACATATATGCACACATATATATGTACATACATATATGCACACATATATATGTACATACATATATGCACACATATATATGTACATACATATATGCACACATATATATGTACATACATCTATGCACACATATATATGCACACACATATATGCACCCATATATATGTACATACATATATGCA	GT	./.
chr1	153492747	N	N	<TRA>	1	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCTCATCTCTCCCCCCCTCTTTTCTTTCTCTCTCTCTCTCTCTTCTCTCTCTCTTTCCTTCCTTATTCCTCATCTTCCCTCCTCTTTCCTTTCTTTCTCTTTTTCTTTCTTCTCTCTCTTTCCTTCCTTATTCCTCATCTTCCTTCCTCTTTCCTTTCTTTCTCTTTTTCTTTCTTCTCTCTCTCTTTCCTTCCT	GT	./.
chr1	153492776	N	N	<TRA>	1	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCTCATCTCTCCCCCCCTCTTTTCTTTCTCTCTCTCTCTCTCTTCTCTCTCTCTTTCCTTCCTTATTCCTCATCTTCCCTCCTCTTTCCTTTCTTTCTCTTTTTCTTTCTTCTCTCTCTTTCCTTCCTTATTCCTCATCTTCCTTCCTCTTTCCTTTCTTTCTCTTTTTCTTTCTTCTCTCTCTCTTTCCTTCCT	GT	./.
chr1	159020405	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTGATTTGATACTGATTAACTTCATTGGGAATGGGTTTCCTAATGTTATGGAAAATTGGCCACATTGATGAGTTCATTAGAGTTAAGTCCATCAGAGTTAAAGCCATCACTCACAGGTGGCCAATATCATCTTCCAGGTCAGATCACATTGCTGGTCTGTGGAGGCAGCCGTCCTGCCTCCACGGACCAGCAGTG	GT	./.
chr1	169058929	N	N	<TRA>	16	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTATAAAATAATATAAATATATACTTATATTAATATATTATTATAAAATAATATAAATATATACTTATATTAATATATTATTATAAAATAATATAAATATATATTTATATTACTATATTATTATAAAATAATATAAATATATATTTATATTAATATATTATTATAAAATAATATAAATATATATTTATATTAATA	GT	./.
chr1	169058983	N	N	<TRA>	16	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTATAAAATAATATAAATATATACTTATATTAATATATTATTATAAAATAATATAAATATATACTTATATTAATATATTATTATAAAATAATATAAATATATATTTATATTACTATATTATTATAAAATAATATAAATATATATTTATATTAATATATTATTATAAAATAATATAAATATATATTTATATTAATA	GT	./.
chr1	178390249	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGTATCTCATAAATACTATTATTATCACCATTTTATAGATGAGGAATCTGAAGTACAGAGAGGTTAAATAATCTTGCCCAGGGTCACACAGCTAATAAGTAGTAGAGCTAAGATTTGAACTCAGGTCTGCCTCTCATATTTGATACTCTTATTTATGTTTTACTTTTTTTTTCCAGTAAGTGACTTTTTTTCACT	GT	./.
chr1	182899674	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GATCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTACTCCAGCCTGGGTGACAGAATGAGACTCCATCTCAAAAAAGAAAAAAAAAATTTTATATATATATATATATATATATATATATATATATATATACACACACACTAAAAATACAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATC;SVTYP	GT	./.
chr1	182899726	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GATCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTACTCCAGCCTGGGTGACAGAATGAGACTCCATCTCAAAAAAGAAAAAAAAAATTTTATATATATATATATATATATATATATATATATATATATACACACACACTAAAAATACAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATC;SVTYP	GT	./.
chr1	193267778	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCAGAGACAGAGACAGGGAGAAAGAGAGAGACGGACAGAGAAAGACAGAGATGGACAGAGAGACAGAGAGAAACAGACAGAAAGAGAGAGAGACAGAGAGAGAGAGAGAGAGACAGAGAGACAGAGAGGGAGGGAGGGAGAGAGAGAGAGAGAGGGAAACAGACAGAAAGGGAGGGGGGCAGGGAGAGAGAGAGA	GT	./.
chr1	202311701	N	N	<TRA>	42	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AACAAAGTAGGTAGGGTAGTGAATTCCTTCATCACTGGAAATGTTCAAGTGGAAGTTAGGTCATCACTTGTTAGGGATAGTGCAGAAAGGATCCTTGCACTGGGTGGCAGTTTGGAATAGATGACTTTTTTTTTTTTTTTTTTTGGGAAGGAGTCGTCGTCTGTCACCCAGGAGGGAAAGCAGCGGGGCGATCTC	GT	./.
chr1	207937205	N	N	<TRA>	38.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TACATTAGAGCCTACACAGTTTAGTTGGTACATTTCATTCTTTTAAGGTTCAAATAAGGGATTTTATTTTCCAGTGAGTTTCCTTGCATTGTTAACAAGTCAACAGCGTTAACGTATGATTTTTTGGTTTTTTTTTTTTTTTTTTACTTTTTATTTTTGGTCTACCCTTCTCATTTATTCCCTTTGTTACA;SVT	GT	./.
chr1	207981233	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGGGAGGAGAGAGGAGGAAGGAGGGTAAGAGGGAGGGAGGGACTCGGGAGAAGAGGTGGAGGAGGAAGTTTCACAGTCTAGTGCATTCCCATCAGATCAGAGAGAGGAATTCATAGAGAAGTCTGACTGCCCTAAGGTTGTTTCCCCTTTTTCCATTTTTTGGAAAATATACACTTCTGCTTTTAACTGTTCCA	GT	./.
chr1	209496915	N	N	<TRA>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCGAGATCTACACTCTTTCCCTACGCGACGCTCTTCCGATCTAGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTATTTCATATATATGTATGTGTATATATATGTGTGTGTGGTGTGTGTATATACAGAGAGGGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATC;	GT	./.
chr1	212301323	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCACCCCTGCCCTGCGCTTCCCGGCTCGGGTCCCCGCCCCCTGCCCCCAAATCCTTTTTTTTTTTTTTTTTTTTTTGTTCAGGTGGTCTCGCTCTGTCATCCAGGCTGGAGTGCAGTGGCGCGACCTCAACTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCTTTCCTCAGCCTCCCAAGTAGCATG	GT	./.
chr1	220075406	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TATGTTTTTTCGTACCCTCTGTTCTTTAGAGAAGATGCAAGTACAGTAAATGGAAAGGGGGAAAAAAACTATTTTAAGGAATGGCTCCATCACTATAGAAAGAAATATGATGTTTCCTTTTTTTTTTTTTTTTTTTTGTCTTTTCCCTTCTTTTGGTCACAAGATGGTTATCATAGCTCTGTGCATGTAATCTGC	GT	./.
chr1	224782795	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGTGCAGCCACATGGGGCAGGCTCTGGAAAAGGAAGTTTATTACACTCACAGGTCCTGGAAGCAGGAGGTGTGGCACACAGGACCACAAGGGAAAGCACCAGTGTAGGTCAGGAGGCAGAAAGGGCCAGAGTGAGGGAAAATCTAGGCCACGGCCTTTACTGGGGTTTGCACAGGAAAGGTCAGGCGGAGCAGCA	GT	./.
chr1	232864349		G	<CNV>		.	SVTYPE=CNV;END=232917630	GT:TCN:MCN	./.:3:1
chr1	232917822		A	<CNV>		.	SVTYPE=CNV;END=249198692	GT:TCN:MCN	./.:2:1
chr1	243066888	N	N	<TRA>	47	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GACAAAGCAAAATTACGACTAAAAAAAAAAAAAAAAAAAAAAACGGAACTCAATACAAAAAAATCAACTGAAAACAAAAGAAGGCAGTAATTTTAAAAACAGCAGGCAAGCCAGGTGCGGTGTCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCTGAGATCAGGAGTTCAAGACCA	GT	./.
chr10	7059511	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TATTGAGCACCAACTGTGAACCTGCACACGCATGTATTTTGCTCCATTGGTTTATCCCCACTCAAGGGCAATACACATTCAAAGCATAAAAATTACATGACCTATGATATTTATTTTGCTAAGATTTTTCACAAAACCCCATCATCATCAGAGATAAGGTAACTCCTGGAGAGACATCACACTCTTTGCAGGTTT	GT	./.
chr10	7634373	N	N	<TRA>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CACACTGCATTGCCTCCCAATAAAAGAAAAAGGAACAGAACAAAAAAGAATACAGCAACTAAAAACCACAATGAGATAACATCTCACGCCAGTCAGAATGGTGGTTATTCAAAAGTCAGGAAACAATAGATGCTGGAAATAAGACAGCGACAGAGAAGAACAGAGATAGAGGAGACAGAGACAGACAGACAGAAT	GT	./.
chr10	7635361	4792535	C	<INS>	398	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=7635362;CIPOS=-11,30;CIEND=-11,30;SVLEN=64;RT=0,11,0;GAP=64;MAPQ=51,51;PID=2.127,1.816;PLENGTH=0.993,0.51;RLENGTH=7579	GT:DR:DV:GQ:HR:PL	0/1:33,32:11,11:398:0,0:398,0,398
chr10	10526100	N	N	<TRA>	24	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGCGAGCGGGAGAGGGAGAACGAGAGAGGGGGGCGGCGGGAGACACGGAGAGAGCAAGTGAGAGAGAGGAGGGGGGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAAAGAGAAAGAAAACGAGCGAGGGAGAGAGCGAGAGAGCGAGAGCGAGAGAGAGAGAGAGAGCGAAAGAGCG	GT	./.
chr10	12157946	N	N	<TRA>	38	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTGTTGCCTAGGCTGGCATGCAGCGGCATAATCTTAGCTCACTGCAACCTTTGCCTACTGAGTTCAAGCAAGGCCTCAGCCTCCGACGTAGCTGGGACTATTAGGTGTGTGCCACCACACCCAGCAATTTTTTTTTTTTTTTTTTTGGGACAGGGTTTCACTCAGTCCTTCATGCTGGGGTTTGTTTGGTTGGA	GT	./.
chr10	27111822	N	N	<TRA>	0.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTAGCCTCTCACTCACTCACTCTCTAAAAATACCCTAACATTTTTGGACTGCGGTTCGGTTCACTCGGTAACTGAAATCACAGAAAGTGAAACTGCAGATAAGGGGAGATTGTTACAGAGTATCAGTTGGGGAAGATGAAAAAATTCTTGAGATCTATAGTAGTGATGGTTGCTCATGTACATTGAGCAGCAAAT	GT	./.
chr10	30061913	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCTCTCTCTCTCCTTCTGTCTGTTTCTCTGTCTCTCTGTCTGTCTCTCTCTCTCTTTTTTAATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTTTTCTCTCTCTCTGTCTCTGTCTCTCTCTCTTAGTTCGGAAGTGCACACGTCTGAACTCCAGCCACGTTCCGATCT	GT	./.
chr10	33386463	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAACTTTGTAAAATATTTAAAGAGATTTATTCTGAGCTAAATGTAAGGACCATGATCTGTGACACAACCTCAAGAGGTCCTGAGAACATGTGCCCAAGGTGGTTGGGTGACAGCCTGGTTTTATATGTTTTAGGGAGACATAAGATATCAATCAGTACATGTGAGGTACATATTGGTTTGGTCTGGAAAGGCAAG	GT	./.
chr10	33386464	.	N	<DEL>	55.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTTAACAAATATTTGAGTACTCATTATATACACATGGCATTCGATAAGCTACATGAGAATATGAGGAAACTGAGTTCTTTAATGTCAATACATCTACAGTCTACTTAAACAGATCTGCAACAAATAAAAAGATAAGGTGATAATAAAAACAATGTCGTTAATTTAACAATTGAAAATAAGTACTCTAAGTTCAG	GT	./.
chr10	38773332	.	N	<INV>	2	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAAGGAATGGAATGGACTTAAATGGAATAGAATGGAATGGAAAGGAATGGACTCAAATGAAATGGAATAGAATGGACTTGAATGGAATGGAATGGACACGAGTGGAATGGAATGGAATGGACTCGAAAGAATGGAATGGAATTCAATTGAATAGAATGGAAAAGAACAGGAAGGAATGGAATGGAATGGACTCGA	GT	./.
chr10	38774477	.	N	<DEL>	21	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATGAATGGAATAGAATGGAATCGAATGGAATGGACATGAATGGAATGGAATGTCCTTGAACAGCATGAAATGAAATGGAATGGAATCGAATGGAATTTACTGGATTGGAGTCCAATGAAATGGACTCTAATGGAATGGGATGGACTCGAATGCTATAAAACGGAATCGGATGGACTCGAATGGAATGGAGTGGAA	GT	./.
chr10	38779847	.	N	<DUP>	43.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAATGCAATGGAATGGAAAGGGCTCGAATGGAATGGACTCCAAAGGACTGGCATCGAATGCAATGGAATCGAATGGAATGGAATCCAATGTAATAGGACGGATTGGAATGAACTCAGATGCAATTGACTGCAAAGGAAAGGTCTCGAATGGAATGTAACGGAATGCAACGTACTCGAATGGAATGGACTCGAATG	GT	./.
chr10	38782059	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATGGAATGGAATCAAACGGAATGGAATGGAAAGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATCAACTCGATTGCAATCGAATGGAATGGAATGGAATTAACCCGAATAGAATGGAATGGAATGGAATGGAATGCAATGGAATGGAATCATCCGGAATGGAATGGAATGGAATGGA	GT	./.
chr10	38783765	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCCCTTCAAGTCCGTTCCATTCCATTCCATTCAAATCCATTCCAATCCATTCCATTGTATTCCATTCGAATCCATTCCATTCCATTCCATAGCATTCCATTTCATTACTTTCTAGTCCATTCAATTGGATTTTATTCCACTCGAGTCCATTCCATTCCATTCTACACGAATCCATTCCATTCCATTCTATTCTG	GT	./.
chr10	38796315	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGAATGGAATGGAATGGAATGGAATGGACTCGAATGCAATTAAATGTACTCGAATGAAATGGAATGGAATGCAGTGGAATGGACTCAAATGGAATAGAGTGAAATTTTCCGGTTTGTAAACTAATGGTATGGACTCTATTGGAATGGAATGGAATGGACTCGAATGGAAGAGAATAGAATAGAATGGATTCAAAT	GT	./.
chr10	38799611	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TAATGTAATAGAATGAAGGGGAGTAGAATGGCATGGAATGGAATGGACAAGAATGTAAAGGAATGGAATGGAATGGAATATAATGGAATAAAATGGAATGGACTCGAATGGAATGGAATTGAATGGAATGCACTCAAATGGAATGGAATTGATTTGAATGGAATGTACTCTAAAGGAATGGAATGGAATGGAATG	GT	./.
chr10	38799669	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TAATGTAATAGAATGAAGGGGAGTAGAATGGCATGGAATGGAATGGACAAGAATGTAAAGGAATGGAATGGAATGGAATATAATGGAATAAAATGGAATGGACTCGAATGGAATGGAATTGAATGGAATGCACTCAAATGGAATGGAATTGATTTGAATGGAATGTACTCTAAAGGAATGGAATGGAATGGAATG	GT	./.
chr10	38800337	.	N	<INV>	18.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCATTCCATTCCATTCCATTCCATTCCGTTCCATTCCTTTCCCTTCCCTTCCGTCCGATTCCATTCCCTTCCATTCCATTCCATTCCATTCCATTGCAATCGAGTTGATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCGATTCCATTCCATTCCGTTCCATTGGAGTCCATTCCATTCCATTCCATT	GT	./.
chr10	38808674	.	N	<DEL>	7	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGAATGGAATTGAATGGAAAGTACTAGAATGGAATGGAATGGAATCGAAAAGAATAGAATGGAGTGGAATGGAACGGAATGGAGTGGAATGCAATAAACACCCGGGGAATGAAGTGGATTGGAATGAAATGGAATGGAAAGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	GT	./.
chr10	38808862	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATGGAGTGGAGTGGAGTGGAATTGAATCAAATGGACTGAAAAGGAAAGGAATGGATTGGAATGCGGTGGAGTGGAATGAACTTGAATGGAATGTACTGGAACGGAATAGACTCGAAGGGAATGGACTCGAATCAAATGGAATCAAATGGAAAGCAATGGAATGGAATGGACTTGAATGGATTGGACAGGAATGGA	GT	./.
chr10	38810831	.	N	<INV>	3	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCCATTCACTCCATTCCATTGCATTCCATTCCCTTCCTTCCGCGACCGTTCCATTCTATTCCATTCCATTAAATTCCATTCAATTCCACTCCATTACAGTCCATTTCATTCCACTCCATTCCATTAGAGTCCGTTACATTCTATTCCACTCGAGTCCATTCTATTCCAAAACAATGAAGTCCATTCCATTCCATG	GT	./.
chr10	38813662	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCATTCCATTCCATTCCATTCCACTCGCGTTGATTCGATTCCATTTAATTCCTTTTCACTCCATCCCATTTCATTCCATTCCATTCCATTCCACTGGGGTTGATTAGATTCCATGGAATTCCATTTCACTCCATTCCATTCCATTCCATTCGATTGCAATCGAGTTGAATCCATTCCATTCCATTCCACTCCCTG	GT	./.
chr10	38813872	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCGGAATGGAATGGACTCGAATGGAATGGACTGAAATGGAACAGATTCAAAGGGAATGGAATTGAATGGAAGGGACTCGAATGGAATAAAATGGAATGGAATGGAATGGACACGAATAGAATGGACTGAAATGGAATGGAATCAATTGGAAGGACTCGGATGGGATGTAATCGAACGGAAAGGAAACAA;SVTYP	GT	./.
chr10	38814121	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AATGGAAAGATATCCAATGGAATGGAATGGACTCAAAGGGAATGGACTGGAATGAAACGGACTCGAATGGAATGGACTGGAGTGGAATGGATTTGAATGGAATGGAAACTAATGGAATGGAATGGAATGGAATGGAAAGAATAGAATTGAATGGAATCGGATGGAACGGAATGGTATGGAATGGAGTTGACTGGA	GT	./.
chr10	38814124	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCAATGGACTCGAAAGTAATAGACTTGAAAGGAATGGAATCAAATGGAATGGAATCGAATGGAATGCAATAGTATGGAAGAGAATCGAATGTAATAGAATCAAATGGAATGGACTGGAATGGAATGGCCTCGAATAGAATGGAATGCAATTGAATGGACTCTAATGGAATGGAATCAAATGGGATGGAAGTGAAG	GT	./.
chr10	38816984	.	N	<INV>	12	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCCATCTCGTGCCATTCCATTATATTCGATTCCATTCCATTCCATTCCATTGCAGTCTATTTCATTCCATTCCATTCGAGTACATTCCATTCCATTCCATGCCATGACATTCCATTCGATTTCATTCTATTCCATTGCATTCATTTCAATTCCGTTTCATTCCGTTACATTGAATTCGAATCCATTGCATTCCA	GT	./.
chr10	38817048	.	N	<INV>	12	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCCATTCGATTTCATTCTATTCCATTGCATTCATTTCAATTCCGTTTCATTCCGTTACATTGAATTCGAATCCATTGCATTCCATTCCATTCCATTCCATTCGTTTCCGTCCCATTCCATTCCAATCCGTTCGATTCCAATCCATTTGAGCCCTTTCCATTCCATTTCATTCCCTTCGTGTCCATTTGATTCGAT	GT	./.
chr10	38818187	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGGATTCGAATTTAATGCAATGGAATGTAATGGAATGGAACGGACACAAACGGTATGGAATGGAATGGAACGGACTCGAAAGCAATGTAATGGAATGTAATGGACTAGAAAGGAATTGAAAGGAATGGAATGGAATTGACTGGAATGGATTGGAATCGAATGGAAGGGAATGGAATGGACTCCAATGGAATGGAA	GT	./.
chr10	38869150	.	N	<DEL>	23	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGGAAAGGAATGGAATGGACTCTAATGACGTGGAATAGAATGGAATCAAATGGAATGGAATGGAATCTAGTTGAATTTAATGGAGTAGAATGGACTTGATTGGAATGGAGTGGAATGGAGGGGAAAGGGGTTCAATGGAATGGAAGGGAATTGAATGGATTCGAGTGGAACAGAATGTAGTGGTTTGGAATGGAC	GT	./.
chr10	38870439	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AATCAACTCGATTGGAATGGAATGGAATTAACCCGAATAGAATGGAATGTAATGGAATGGAACGGAACGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGACCCGACTGGAGGGGAAGGGAATGGAATGGAATGGAATTGTGTGGAATGGAATGGAATGCAATGGAGCGTAAAGGAATTG	GT	./.
chr10	38870960	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCTATTTAATTAGAGTCCAATCCATTCATTTCCATTCCATTCGAGTCCAATCCATTCCATTTGAGTCCATTCCATTCCACTCCATTCTATTCGAGTCCATTCCACTCCATTCCTTTCCATTTCCGTCCATTCCATTCCAATCTATTCCTTTCGGTTCCATTCCATTCAATTCCATTTTATTCCATTCCATTCCAT	GT	./.
chr10	38871208	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCCGTTCCATTCCATTCCATTACATTCGGATTGATTCTATTCAATTCCCTTACACTCCATTACATTCCATTCCATTCGGGTAGTTTCCATTCCATTCCATTCCATTCCTCTCCATTCCATTGCACTCGAGTTGATTCCATTCCATTGCATTCCATTCCATTCCATCCAATCCCTTCCGGTCCCTTCCCATCCAA	GT	./.
chr10	38879347	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AATGGAGTCCACATTGAATGAAAATGAAAGGAGTCATAATCTAATGGAATCGAAGGGAATCATCATCAAATGGAATCGGATGGAATCATTGAACAGAATTGAATGGAATCGTCATCGAATGAATTGAATGCAATCATCGAATGGTCTCGAATGGAATCATCTTCAAATGGAAAGGAATGGAATCATCCCAGAGAA	GT	./.
chr10	39078345	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTATTCAATTCCATTCCCTTACATTGCATTATATTTGATCCCATTCCATTCGACTCTAGTACTTTCAACTCCATTCCATTCCATTCCGTTCCATCCAATTCCATTTCATTCTATTCGTTTCCCTCCGATTCCATTCCATTCCATTCCTTTCCATTCTACTCGGTTTGATTCCATTTCGTTCCATTCCATTCCATT	GT	./.
chr10	39080689	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TATCAATGGGATGGAAGGGAATGGAATTGAAAGGTATGGAATTGCAAAGAAAGGAATCCCCCCGAGTGCAGGGGAATGGAATGGAATAGAATGCAATGGAATGGAATCATACGGAATGGAATGGAATGGAATTGAATGGAATGGAATGGAATGGAATGCAATTAACCCGAATAGAATGGAATTGAATGGAATGGA	GT	./.
chr10	39081297	.	N	<DUP>	15	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CATTCCATTTCATTACATTCCATTTGAATATATTCCATTCAAATAAATTACATTGCAATCCATTACATTCCATTCAGTCCTATTCCAGTCTATTCCATTCCAGTCCACTCCATTCGATTCCATTCCATTCGATTCCATTCCAGTCTATTCCACTTCGATCCATTCCAATCCATT;SVTYPE=DUP;CHR2=10;E	GT	./.
chr10	39081392	.	N	<DUP>	15	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CATTCCATTTCATTACATTCCATTTGAATATATTCCATTCAAATAAATTACATTGCAATCCATTACATTCCATTCAGTCCTATTCCAGTCTATTCCATTCCAGTCCACTCCATTCGATTCCATTCCATTCGATTCCATTCCAGTCTATTCCACTTCGATCCATTCCAATCCATT;SVTYPE=DUP;CHR2=10;E	GT	./.
chr10	39084428	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTGAGTCTACTACCTTCCATTCCCTCCCACTCCCCTCCATTCCATTCCATTCACTTCAGGAAGATTCCATTCCATTGCATTCCACTCCCTTCCATTTCCCTGCCCTCGCGTTGATTCCATTCCATGACATTCCATTCCATTCCATTCCATTACATTCGGATTGATTCTAATCAATTCCCTTGCACTCCATTACAT	GT	./.
chr10	39085562	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTCGCCTGTCCTTTCCCTTCCACTCCATTCCATTCCTTTCCGGTGCAGTCCTTTCCATTCCCTTCCATTCCATTTCATTCCATTCCATTCCATTCCTTTCCATTCCATTTCGTTCCACCAGGATGGAATCCATTCCATTCCATTTCATTCCATTCCATTTCATTCCATTCCATTCGATTGGATTCCGTTCCATTC	GT	./.
chr10	39090276	.	N	<INV>	1	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTTCAAGTCCATCACATTCGTGTCCATTCCATTCCATTCCAATCCATTCGATGCCATTCCATTGGATTCTATTCCTTTCGACTCCATTCCATTCCATTCCTTTCCAACCATTTCCATTCACTTCCATCCGTTTCAATTCCATTCTGTTCCTTTCCATTCCATTCCAGTCAATACCATTCCTTTGGGTTCCATTCC	GT	./.
chr10	39090454	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCCAGTTCATTCCATTCCATTACATTGCATTCCATTCCATTCCAATCGGGTTGATTTCATTCCATTCCATTCCATTCTAATCCATTCCATTCCGTCCCAATCCCTTCCATTCCATTCCATTCCATTCCCTTCCCTTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCGATACCTTTCCATTACGCTCCAT	GT	./.
chr10	39092911	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCCATTCCACTTTTGTTGATTCCATTCCATTCCATTCCATTCCATTCCTTTGCTTTCCCTTTCACACGGGTTGATTCCATTCCATTCCATTCCATTCCATTGCATTGCATTCCATTCCTTTCCATTCTAGTTGATTCCATTCCATTCCATTCCAATGAAATCGAGTTGATTCCATTCCATTCCATTCCATTCCA	GT	./.
chr10	39095501	.	N	<DEL>	1	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCCATTCCATTCCATTTCTTTATGTTCTATTCCATTCCGTTCGATTCCATTTTATTCCAGTCCATTCCATTCGAGTCCATTGCATTCCAGTGCAATTCATTTGATTCCACTCCATTCGATTCTATTCCACTCAATTCCCCTCCGTTCCATTCCTTTGCGTTCCTTTCTATTCCATTCCATTGCATTCCATTCCAT	GT	./.
chr10	39113541	.	N	<DUP>	4	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTTCCATTCTCTTCCATTTCATTCGAGTTGCTTCCTTTCGAGTTGCTTCCCTTCCCTTCCTTTCCCTTCCATCCCCTTGCACTCCGCTTCCTTCCTTTCCATTCCATTCCATTTCATTCCATTCCATTCCATTCCATTTCATTCCATTCCATTCCATTCGTGTCCATTCCACTGCAGTCCATTCCATTCGTGTCC	GT	./.
chr10	39117944	.	N	<INV>	14	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGAATGGAATGGAATGGAATGAAATGAACTCGAATGGAATGGAATGCAATGGACCTTAAAGGAATGGAATGGAATGGAATGGAAAGGAGTCAAATGGAATTGAATATAATGGACTGGAGTGGAATGGAATGGAATGGAATGGACTCGAATGCAATTAAATGTACTCGAATGAAATGGAATGGAATGCAGTGGAAT	GT	./.
chr10	39145031	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGTTCCATTCCAGTCCATTCCATTCCATTCCATGACCTTCCATTGGATATCTTTCCATTACACTCCATTCCATTCTATTCCTTTCAATTCCAATCAATTCCATTCCATTTGATTCTATTCCAATCGATTCCCTTCCATTCGTTTCCATTCAATGATTCCATTTGATTCCTTTTGATGATTATTCCAT;SVTYPE=	GT	./.
chr10	39148962	.	N	<INV>	1	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTAGAATGCAATGGAATGCAATGCAATCTTATTGAATGGAATGGAATCCAATGTAATGGAATGGAATGTACTGGAATTGAATGGACTCCAGTGGAATAGAATCAAATGGAATGGAATGGAATGGAATGGAATGGAATCGAATTGAATGAAACGGATTCAAAAGGAATGGATTGGATCGGAACGAAATGGAATGGA	GT	./.
chr10	42363431	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCCATTCCACTCGGTTTGATTACATTCCGTTGAATTCCATTCCATTCCTTTCGAGTTGATTCCATTACATTACATTACATTACATTACATTACATTACATTACATTACATTACATTCCACTCGGTTTAATTTCATTCTGTTGAATTCCATTCCATTCCTTTCCAGTTGATTCCATTCC;SVTYPE=DUP;CHR2	GT	./.
chr10	42368071	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AATTCATGTCCATTCCATTCCATTCCATTCATTTCCATTCGAGTCCATTCTTTTCCATTCCATTAGGGTACATTCCAATTTATTCCAATTGAGTCAATTCCATTCTATTCAATTTGAGTCCAATCCATTCCACTGCGTTTGAATCCATTCCATTCCATTCCATTCTATTCCAATCCATTCCATTACATTCAATTC	GT	./.
chr10	42375150	N	N	<TRA>	1	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCCATTGCATTCCATTCCATTCCTTTCTGTTCCATTCAATTCCATTCCATTCCATTCTATTCGTGTTAATTCCATTCCATTCTATTCCATTCCATTCCATTGAAATCGAGTTGATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCTTTCCATCCCATTCCAT	GT	./.
chr10	42859703	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAAAATTATCCAGGTGTGGTGTTGTATGCCTGTAATCCCAGCTATTCGGGAGGCCGAGGCAGGAGAATCGCTTGATCCCAGGAGGTGGAGGTTACAGTGAGCAGATGTCTTGCCATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTACATCTAAAAAATAACATAATAAAATAAAATAAAAACATTATAAGGG	GT	./.
chr10	60477224	N	N	<TRA>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAGAACTTCCAATACTATGTTGAATAGGAGTGGTGAGAGAGGACATTCTTGTCTTGTGCTGGTTTGCAAAGGGAATCCTTCCAGGTTTGCCCATTCAGTATGATATTGGCTGTGCGTTCTCATTAATAGCTCTTATTATTTTGAGATATGTTCCATCAATACCTAGTTTATTGAATGTTATTAGCATGAAGGGTT	GT	./.
chr10	60477422	N	N	<TRA>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAGTTTAAATAAGAGTTAAAAAAATAAGCAGAGAACTTCTTCTATATAAGCACGTAAACAGTAATACCATTATTTTTGTAGCTGCATGAAATACCATTGCATGTATATGTAGGATATGGCTATAATATACATTTCAACAGATTTGATGCCGCGATCTCCACGTTGACCTCCCCGGAGAAGGTGAAGTTCTCCATG	GT	./.
chr10	62229266	N	N	<TRA>	11	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTTAGTGTATATATATATATATATACACACCACTTTTAATGTATATATATATACACATACACACACACACAGTGCTTTTTAGTATATACTATATATATATAGTGGTATGTGTGTGTATGTATATATATATATATGGGGGTATATATATATATATGGGGGTATATATATATATAGGGTGGTCTATATATATCTTT	GT	./.
chr10	73519588	N	N	<TRA>	3	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GACTGGCGTGGGGCGCTAGGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTGTGTGTGTATGTATATATGTGTGTGTGTATGTATATATGTGTGTGTGTGTATATATACACACACACACATATATACACACACACACACACATATACACACACACACACATA	GT	./.
chr10	80228382	N	N	<TRA>	3	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAACAAAATGAAAAGTCTCCCATGTCTACCTCTTTCTACACAGACACGGCAACCATCCGATTCTCAATCTTTTCCCCACCTTTCCCCCCTTTCTATTCTACAAAACCGCCATTGTCCTCATGGCCCGTTCTCAATGAGCTGTTGGGTACACCTCCCAGACCGGGTGGTGGCCGGGCAGAGGCGCCCCTCACCTCC	GT	./.
chr10	82093159	N	N	<TRA>	3	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCTGGGATTACAGGCGTGAGCCACCACACCCAGCCAATAATAATTTAATTATACATTTTATAATAATGAAATGAGTATAACTGGATTGTTTGTAACACAAAGGATAAAATCTTGAGGAGATGAATACCCCATTTGCCATGATGTGATTATTATACATTGCAT;SVTYPE=TRA;CHR2=7;END=153127688;	GT	./.
chr10	83641806	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACCCTTGCCCTGGGAATCTCTTGCAGTTTTCTTGTCTATATGATTCAGTTTCTTTTTTTATGCTTTAAAAAACAACTTACCTTTTGGAGTTTCTTCAAAGCATTCAACTACATTTTAATAGAAACTACAATTATCTTTCATATTATAAAATCAAGTTTATAATTTTTATTTTTGTAACAATTTATGTCAGTATTC	GT	./.
chr10	89700299	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATGATCACACCACAGCACTCTAGCCTAGAGCCTCCCTGTGTGGCAGGCTCTACACTTCAGATAGGCAACAGATCGAGACCTTGTTTCACAAAACGAACAGATCTGCAAAGATCAACCTGTCCTAAGTCATATAATCTCTTTGTGTAAGAGATTATACTTTGTGTAAGAGGTCCACCAGAGGAGTTCAGCAATTTG	GT	./.
chr10	96403418	BI_GS_DEL2_B1_P0361_1	G	<CN0>	100	.	AC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=-8,9;CIPOS=-8,9;CS=DEL_union;EAS_AF=0;END=96521567;EUR_AF=0.001;MC=YL_CN_FIN_2342,UW_VH_7306,SI_BD_10853;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	0|0
chr10	96404664	DUP_uwash_chr10_96404664_96484330	A	<CN0>	.	.	AC=3;AF=0.00059904;AFR_AF=0;AMR_AF=0;AN=5008;CS=DUP_uwash;EAS_AF=0.002;END=96484330;EUR_AF=0.001;NS=2504;SAS_AF=0;SITEPOST=0.9763;SVTYPE=DEL	GT	0|0
chr10	96410159	YL_CN_YRI_3150	T	<CN0>	100	.	AC=2;AF=0.00039936;AFR_AF=0.0008;AMR_AF=0;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=96422079;EUR_AF=0.001;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	0|0
chr10	96484141	BI_GS_CNV_10_96484141_96528363	A	<CN0>	100	.	AC=2;AF=0.00039936;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=0,500;CIPOS=-500,0;CS=DEL_union;EAS_AF=0;END=96528363;EUR_AF=0.002;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	0|0
chr10	96495219	DUP_uwash_chr10_96495219_96575369	G	<CN0>,<CN2>	.	.	AC=1,1;AF=0.00019968,0.00019968;AFR_AF=0,0.0008;AMR_AF=0,0;AN=5008;CS=DUP_uwash;EAS_AF=0,0;END=96575369;EUR_AF=0.001,0;NS=2504;SAS_AF=0,0;SITEPOST=1;SVTYPE=CNV	GT	0|0
chr10	96497316	BI_GS_DEL1_B1_P1784_372	A	<CN0>	100	.	AC=1;AF=0.00019968;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=-2,2;CIPOS=-2,2;CS=DEL_union;EAS_AF=0;END=96559107;EUR_AF=0.001;MC=YL_CN_FIN_2343,EM_DL_DEL12169;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	0|0
chr10	96527914	BI_GS_DEL1_B2_P1784_346	T	<CN0>	100	.	AC=2;AF=0.00039936;AFR_AF=0;AMR_AF=0;AN=5008;CIEND=-11,12;CIPOS=-11,12;CS=DEL_union;EAS_AF=0;END=96567591;EUR_AF=0.002;MC=YL_CN_IBS_2249;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	0|0
chr10	96611034	ALU_umary_ALU_8175	T	<INS:ME:ALU>	.	.	AC=23;AF=0.00459265;AFR_AF=0;AMR_AF=0.0014;AN=5008;CS=ALU_umary;EAS_AF=0;EUR_AF=0.0209;MEINFO=AluYj3,4,278,-;NS=2504;SAS_AF=0.001;SITEPOST=1;SVLEN=274;SVTYPE=ALU;TSD=AGGCTACACACTTTT	GT	0|0
chr10	104889480	N	N	<TRA>	0.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACGGCAGCCTCCGCCCGGCCGCCGCCCCGTCCGGCCAGCCGCCCCGCCCGGGAGGGAGGTGGGGGGGCCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCTTCTGCACAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCTGTCCGGGAGGGTGGTGGGGGCGT	GT	./.
chr10	109628605	N	N	<TRA>	30	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TATGTATGTGTATATATATGAGTATATATATGTGTGTGTGTATATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGCGGGCAGAAAAGGCAACAGGCAATATAGGGATAGATAATATCATGGAACCTACCAACACT	GT	./.
chr10	125013984	N	N	<TRA>	1	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCACCACCACCACCACCACCACCGTCGCCATCACCATCATCATCATCCCCCCACCCCCACCACCACAACCATCATCACTATCATCATCATCATCACCACACCACCACCATCACCACCACCACCATCACACCACCACCACCACTGTCGTCATCACTATCATCATCATCACACCACCACCACCACCATCACCACACC	GT	./.
chr10	126727725	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACTTAGCGCTTATCCACAAGGGCCATTCTTTAGGGAACTTTGCAACTCTGAGATCAAAAGGCAAAGCAGTCCTCTAAGAACTTAGGGGAACTCGCAGGAGTCTGCGTGCATGACGCCACTATGAACCCAATATAAATTTGTTCACAAACTCTATAGTTCACACGATGGGTT;SVTYPE=DEL;CHR2=10;END=	GT	./.
chr11	1162660	.	N	<INV>	38	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGAGTGAGTGAGTGAATAGGTGAGTGGGTGAGTGGGTGAGTGGGCGAGTGAGTGAATGGGGGAATGGGTGAGTGAATGGTTGAGTCAGTGAGTGGGTGAGTGAGGGGGGGAGTGGGTGAATGGGTGAGTGGGTGAGTGGGTGAGTGAGTGGGAGAGTGAGTGGGTGGATGAGTGAGTGGGCGAGTGAGTGGGTGG	GT	./.
chr11	3152705	N	N	<TRA>	8.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGGGGGGGTGGGGGGGTGGATGGATGGATGAATGGGTGGATGGATGGATGGGTGAATGGCTGGGTGGGTGGGTGGATGGATAGATAGTTGAGTGGGCAAATGGATGGATGGATGGGTGGATGGGTGGGTAGATGGATGGATGGATGGATGGATAGATGGATGGATGGATGGATGGACGGACGGATGGGGGGGTGG	GT	./.
chr11	6153093	N	N	<TRA>	17.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGTAGGTACATACACCAAAAAAAGTAAAGTAAAAAAAAAATAACGAAAATAAAAAAAGAAAGAAAGCAAGAAGAAAGAAAGAGAAAGAAAAAAAGGCATAAAGAAAGAAGGAAACAAAGAAAGAAAGGAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAAGAAAGAAG	GT	./.
chr11	6153148	N	N	<TRA>	17.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGTAGGTACATACACCAAAAAAAGTAAAGTAAAAAAAAAATAACGAAAATAAAAAAAGAAAGAAAGCAAGAAGAAAGAAAGAGAAAGAAAAAAAGGCATAAAGAAAGAAGGAAACAAAGAAAGAAAGGAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAAGAAAGAAG	GT	./.
chr11	22732056	N	N	<TRA>	53.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAGAGACTCTGAATTCACAATTTGCTGCCAACAATGATAAATTATGATGTCATGGAACATGCAGAATATTTGTTGGAAATGAAAAATTCAAGATATATATATATGTGTGTAGATATATGTGTGTGTGTGTGTCTGTGTGTATATATAGATATATATACACACACTGAAGGAAAGGTGTGGGTAAATGAAGAAATA	GT	./.
chr11	24623866	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACATATATATGTACATACATATATGCACACATATATATGTACATACATATATGCACACATATATATGTACATACATATATGCACACATATATATGTACATACATATATGCACACATATATATGTACATACATCTATGCACACATATATATGCACACACATATATGCACCCATATATATGTACATACATATATGCA	GT	./.
chr11	37460103	.	N	<INV>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATAATGCTTATTTAGAGTTAGCATTGATTACAATTTATGTTTAGGATAAATCACGCTGGAGCCCCTTCTTCCATAGGTACAATAATAATTGCATTTATTATTATGGAAGAATAATAGCAAAAGCTGAAAAAATATTTTAATCTATTTGATAGCCAAATAAACCGGCATATTGTGAAGATTATTAAAACTACTGAA	GT	./.
chr11	39523761	N	N	<TRA>	20	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTCCACCCCCACACACACCCACACACAAACACACATATACATCCACACACACCCCCACGCTCACACACACACATATTCATAGACACACTCACACACATCCATATACACCCTCACACACACACACACACAAACATATACATCTTCACACACACCCACGCTCACATACACACATATTCATAGACACATTCACACACA	GT	./.
chr11	46350245	N	N	<TRA>	28	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTTTCTGTCTTTCTTTCTTTTTCTTTCTTTCTTTCGTTCTTTCTTTCTCTCTCTCTTTCTCTCTTTCTTTCTTGTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTGT	GT	./.
chr11	46919573	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCGGCGGGGCCCGCCGCTGGCCGGTCGGGGCGGCCGGGGGGGGGCGCGCGCCGCCGCCCGGACGGGGCGGCTGGCGGGGCGGCGGGCCGGCGCCCCCACCCCCCTCCCGGACGGGGTGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACG	GT	./.
chr11	46919684	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCGGCGGGGCCCGCCGCTGGCCGGTCGGGGCGGCCGGGGGGGGGCGCGCGCCGCCGCCCGGACGGGGCGGCTGGCGGGGCGGCGGGCCGGCGCCCCCACCCCCCTCCCGGACGGGGTGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGAGGGCTGACCCCCCCACCTCCCTCCCGGACG	GT	./.
chr11	48878105	.	N	<INV>	10.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAAACACACTTTTTGTAGAATCTGCAAATGGATATTTGGACGGCGTTGAGGGCTTCGTTGGAAAGGGGAAAATCTTCACATAAAAACGAAAAAGAAGCATTCTCAGAACGTTCTTTGTGACGTTTGCATTCAACCAACACAGAGATGAACATAACATTTCATAGAGCAGTTTTGAAACACCCTTTTCGTTTAATC	GT	./.
chr11	48961135	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCAAAACTGCTCTGTCAAAAGGAAGGTTCTTCTATGTTAGGTGAGTGCATACGTCATAAAGGAGTTTCTGAGAATGTTTCTGTCTAGTGGTTATGGGGAGAGATTTGCTTTTTCACCGAGGGCCTCAGAGCGCGCCAAATATCCACTTGCAGATTCTACAAAAAGAGTGTATCAAAACTGCTCTGTCAAAAGGAA	GT	./.
chr11	50072654	N	N	<TRA>	5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTGAGGAAGGAGAATGGCGTGAACCCAGGTGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCAATCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAGGTTTAACTCTATAGGTTGAATCCACACATCACCAAGCAGTTTCACAGATAGCTTCTATCTAGTTTATATCTGGGGATAT	GT	./.
chr11	50780247	.	N	<INV>	5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTTTCCAACATACGTAAAAAAGTACTGGAAATGAACACTTGCAGATTCTACAAAAAGTATGTTTCAACACTGCTCTATCAAAAGAAAGGTTCAGCGATGTGAATTGAACACACACATCACAAAGGAGTTTCAGAGAATGCTTCTGTCTAGTGTTTAAGTGACGATATTACCTTTTCCCACATAGGCAACA;SVT	GT	./.
chr11	56869836	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGAACAAAAAGAAGAAGAAGAAGAAAAAAAAGAAGAAGAAAAAAGAAGAAGGAAGAGGAAGAGGAACAAGAACAAGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	GT	./.
chr11	58171838	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATTGGGAGAAATACCTAATGCGAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCAAATGTATACATATGTAACTAACCGGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAATGCTAGATGTTAAGCACAGCCTAATGAGTGCTAGTTATAATATTAAATATTA	GT	./.
chr11	69782213	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAGAAAAAGGAAATAAAATAAGACAAAAAGAGAAAAAAAAGAAAAGGAAGGAAGGAAAGAAGGAAGCAAGAAGAAGGAAGGAAGGAAGGGGAAGAAAAGAAGAAGGAAGGGAGGGAGGAAAGAAAAGAAAGAGAAAAAAGAAAGAAAGAGAGAAAGAAAAGAAAGAAGGGAGGAAGGAAGAAAAAGAAAGAAAAG	GT	./.
chr11	80325525	N	N	<TRA>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TAGATTTTTTTTCTATTTCTGTAAAGAATGTTACTGGTATTTTGAAATGAATTTAATTGAATCTGTAGATTGCTATGGATAGTATGGATATTTTAACAATATTGATTTTTCTAATTCATAAAGATTGAATTTTTTTTTTTTTTTTTTTTTTGCTTCTTATGTCTCTTTTATTTATTTTTTCTCATCAGCTTTTAT	GT	./.
chr11	80785602	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TATGTTCTTTCTTCTAATACTTTGGGTTTGTTGTGCAGATGTCATTTACTCTTTTGCTTTCTAATAATTTTATTCATCTATATTTTATTCTATTATTAATCAAATAATATGCAGTGAGCTGATTGCTTTCTATTCCTAAATAGTTACCGCAATTTGAACTGGCACATGGTAGACATTCAATTATCTCTTAAATAA	GT	./.
chr11	85041694	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAAGCTGGAGGCGTACGATCACTGCGAGGAGAGGTGGGGAGGGGGGCGGGTCGGGAGGGGCATAGCATTGGGAGGTATACCTAATGCTATATGACAAGTTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGCGCACATGTACCATAAAACTTAGATTATAATAAAAAA	GT	./.
chr11	85246640	N	N	<TRA>	22.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCATGCGGTAGCTCCTGGCTATAGTTAGGGTTTTTTGTTTTGTTTCGCTTTTATGGCTGAATACTATTCCAGTGTATGGCTATATTACATTTTGTTTATTCATTCATTGGTTGGTGGCCATTTGGGTTATTTCCTCCTTTGGGCTATTATGAATAATGCCGCTATGAACATTCATGTACAGATTTTGTGCAGACA	GT	./.
chr11	85246752	N	N	<TRA>	22.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCATGCGGTAGCTCCTGGCTATAGTTAGGGTTTTTTGTTTTGTTTCGCTTTTATGGCTGAATACTATTCCAGTGTATGGCTATATTACATTTTGTTTATTCATTCATTGGTTGGTGGCCATTTGGGTTATTTCCTCCTTTGGGCTATTATGAATAATGCCGCTATGAACATTCATGTACAGATTTTGTGCAGACA	GT	./.
chr11	89637792	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACACCTTCTGTGACATTTGGAGTAACATCCCCTAGGATAGTACAAATAATATCACAGGGTGTACATCCCCTGTGACCTGAGGAGTAATATCTTTCTAGAATACTATGAATAGTATCACAATGTATACACCCCGTGTGTCATTAGGAGTAACATCCCACAAAACTATAACGAATAATTTCACAAGGTGTACACCCT	GT	./.
chr11	89639891	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCTAATATCCAGGGGGTAGAGTATGACATTACTCCCAATGTAACAGTGGGTGTACATCCCCCCTGTGATATTTCTCTTAACATTCAAAGGCGGAGAGGATGATATTACTCTCAATCTCGAAGAAAGTGTACACTCCCGAGTGATATTGTTCCTAAT;SVTYPE=INV;CHR2=11;END=89671286;SVLEN	GT	./.
chr11	97542045	N	N	<TRA>	32	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACTACAGAGAACATAAGTAGAAAATAGAATTATATTATTTATCTTATTTTTTTTTAGAATATATAATAACCATCACTTTAAGAGGAGCACTGTTTTTTATATATATATATATATATATATATATATATATACACACACATATATACGTATATATGTGTGTGTATATATATATATATATATATATATATATATAAA	GT	./.
chr11	97542047	N	N	<TRA>	36	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACTACAGAGAACATAAGTAGAAAATAGAATTATATTATTTATCTTATTTTTTTTTAGAATATATAATAACCATCACTTTAAGAGGAGCACTGTTTTTTATATATATATATATATATATATATATATATATACACACACATATATACGTATATATGTGTGTGTATATATATATATATATATATATATATATATAAA	GT	./.
chr11	97542101	N	N	<TRA>	32	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACTACAGAGAACATAAGTAGAAAATAGAATTATATTATTTATCTTATTTTTTTTTAGAATATATAATAACCATCACTTTAAGAGGAGCACTGTTTTTTATATATATATATATATATATATATATATATATACACACACATATATACGTATATATGTGTGTGTATATATATATATATATATATATATATATATAAA	GT	./.
chr11	99052297	N	N	<TRA>	5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TACTAGTAATCAGTACCTGGGTCATCATGTCTGAGGTGGAGAGTGAATTCATCAACTGGGCAGCAACCACGGCAACAGAAGCCAACCGCAGTCAATGCTGGCTATGCATCAAATTGCCAGAGACCACAGGAAATGGACTGCCTTGCAGAGTTGTCCTTGCCAATATTTCTGAATGGCTCTGTCACTACAAATGGG	GT	./.
chr11	100400476	N	N	<TRA>	18	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCCTTCAAATGGCCACACTACCTCTCCAGTAAGTTTATAAATCAGTCCAAGATAGCTAAAATTACAGAAATCAAATTCAGAATATGAATAGAAATAAAGATCATTAAAATGCAGAAGTAACTTGAAACTCAATTCAAAAACGTTAAGAATCATAATGAAATGATACAGGAGCTGAGAGACAAAAGAGCAAGTATT	GT	./.
chr12	1029142	.	T	<RPL>	.	PASS	END=1029182;HOMLEN=0;SVLEN=-40;SVTYPE=RPL;NTLEN=51	GT:AD	0/1:23,1
chr12	12476074	N	N	<TRA>	9	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGGAGGGGGGGGGGGGGGGGAAGAAAGGGGGGGGAAGGGGGGGAGAGGAGGGGGGGGAGAGGAGGAGGGGAGGGGGAGGGGAGGGGGAGAGGAGGGGGGGGAGGGGAGGGGGAAGGGGAGGAGAGGAGGAGGAAGGGGAGGAGAGGAGGAGGAAGGGGAGGAGAGGAGGAGGAGGAGAGGAGGAGGAGGAGAGG	GT	./.
chr12	15513754	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TATACCTATATGTTTATAAGTTAAAACACACACACTATGTGTGTGTATATGTGTGTATATATACGTGTGTATATATGTGTGTATATGTGTGTATATATACGTGTGTATATACACACACATATATACACACGTATATATACACACACATAGTGTGTGTGTGTTTTAACTTATAAACATATAGGTATATGTTTAAAC	GT	./.
chr12	22210826	N	N	<TRA>	29.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGGAACAAAGCTGAAACATCATTTAAAAAATTACATTAATTCTCCAACTTTAGGCATCTTTTTTTTCTTTTTTTCTTTTTTTTAGACAGTCTCGCTCTGTTGCCCGGGCTATAGTGGCACGATCTCGGCTCACTGCAATCTCCCCCCTCCGGGTTCATGGTA;SVTYPE=TRA;CHR2=1;END=155855386;	GT	./.
chr12	33135502	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAAGACAGAGACAGACAGAGAGAAACAGGCAGAAAGCGAAAGAGAGAGAGAAAAACAGGCAGGACAGGAGGGAGAGAGAGAGAAAGAGAGAGAAAGAAAGGACAGAAGGAGCGAGAGAGGGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCAATCCCACCACGAGGACCCGG	GT	./.
chr12	38387284	.	N	<DEL>	14	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGATGTGTGAATTCATCTCACAGGGTTAAATCTTTCCTTTGATTCAGCAGGTTGGAAACACTCTTTTCGTAGAACCTGTGAAAGGACGTTGGGTAGCCCATTGAAGCCTATTAGGCAAAATCGAATACCCCCAGATAAAAACAAGAAGGAATCTATCTTTGAAACTGCTTTGTGATGTGTGGATACATATCACAG	GT	./.
chr12	49236229	N	N	<TRA>	2.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTGATGTGGGGAGCGCCTCTGCCCTGCCGCCCCGTCTGGGAAGGAGGTGGGGGAGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACGCTCGGATCG	GT	./.
chr12	63358705	N	N	<TRA>	30	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTGGCATCCTGGGACTCTATGAATTTAGAAATCCGTCATGCAAGAGGAGTTCAGGTGTAAATTTTGTTACTATAAATCACTTGCTCATCTAACAGGAATTGTTTACATGTAGCTGATGATCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGACCGGGTTCCCCCCTTTTCCCCCGGGTTGGATGGCATG	GT	./.
chr12	69610356	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCTTTTTCTTTTTCTTATTATTTTTTTGAGTCAGAGTCTTCCTTTGTCTCCCAGGCTGGAATGCAGTGGCACTATCTTGGCTCACTGCAACCTCTGCCTCCCAAGCTCAAGAAGTCCTCCCACCTCAGCCTCCTGAGAAGCTGGGACTACAGGTGCACCACTGCACCTG;SVTYPE=TRA;CHR2=20;END=50	GT	./.
chr12	72666892	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAGAACTTCCAATACTATGTTGAATAGGAGTGGTGAGAGAGGACATTCTTGTCTTGTGCTGGTTTGCAAAGGGAATCCTTCCAGGTTTGCCCATTCAGTATGATATTGGCTGTGCGTTCTCATTAATAGCTCTTATTATTTTGAGATATGTTCCATCAATACCTAGTTTATTGAATGTTATTAGCATGAAGGGTT	GT	./.
chr12	86855012	N	N	<TRA>	30	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTGTCTCTTTTAAACAAGTTTTCATATTTTACTTCATTTTGTTCCTGAACTCAACTTGATAATAAAATTATTGGTATAAAAGGTTCTATTTGTAGGGACCCATATGAACTCATACCTTTCTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCA	GT	./.
chr12	87964654	N	N	<TRA>	23.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATATATTTATGTACACATGTATACATGCATGTGTATATATTTATGTACACATGTATACATGCATATGTATATATTTATGTACACATGTATATATGCATATGTATATATTTATGTATATATATATACATATATATGTATATATTTATGTATACATGTATATATGTATATATACGTGTATATATGTATATATGCATG	GT	./.
chr12	87964682	N	N	<TRA>	13.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TATACATGTATATATATATATATGCATTTATAAATGTATATATGCATGTATATATGTATACATGCATGTATAAATGTATACATGCATGTATATATGTATATATGTATATATTTATGTACACATGTATATATGTATATATTTATGTACACATGTATACATGCATGTGTATATATTTATGTACACATGTATACATGC	GT	./.
chr12	87964795	N	N	<TRA>	13.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TATACATGTATATATATATATATGCATTTATAAATGTATATATGCATGTATATATGTATACATGCATGTATAAATGTATACATGCATGTATATATGTATATATGTATATATTTATGTACACATGTATATATGTATATATTTATGTACACATGTATACATGCATGTGTATATATTTATGTACACATGTATACATGC	GT	./.
chr12	117340491	N	N	<TRA>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCGGGAACCCCAGCCGGGGAAAAAAGAGCAAGCCCCTGTCAAAAAAAAAAAAAAAAAAAGAAATCAGTCTTAGCAGAACCTTGATCTTGGATGTCCAGCCTCCAGAACTGTGAGAAGATAAGTGTTTGCCTTTTTTTTTTTTTTTTTTTGATTGTTGGTCCTTTTCTTTCCCCCCGGCTGGGGGTCAGTCGTG	GT	./.
chr12	117340525	N	N	<TRA>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCGGGAACCCCAGCCGGGGAAAAAAGAGCAAGCCCCTGTCAAAAAAAAAAAAAAAAAAAGAAATCAGTCTTAGCAGAACCTTGATCTTGGATGTCCAGCCTCCAGAACTGTGAGAAGATAAGTGTTTGCCTTTTTTTTTTTTTTTTTTTGATTGTTGGTCCTTTTCTTTCCCCCCGGCTGGGGGTCAGTCGTG	GT	./.
chr12	120861558	N	N	<TRA>	36.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCCTTCCCTCCTTCCCTCCCTCCCCTTCCCCCTCCCCTTCCCCTTCCCCCTCTCCTTCCCCTTCTTCTTTCCTTCCTTCCCTTCTCTTTCCTTCCTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTGTGATGGAGTCTCATGCTGTCGCCCAGGCTGGAGTGCAATAGC	GT	./.
chr12	129771773	5003765	T	<INS>	1391	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=129771774;CIPOS=-16,8;CIEND=-16,8;SVLEN=251;RT=0,27,0;GAP=251;MAPQ=53,54;PID=1.756,2.315;PLENGTH=0.998,0.996;RLENGTH=9233	GT:DR:DV:GQ:HR:PL	0/1:11,11:27,27:16:0,0:1391,0,16
chr13	20385956	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAAGTAACCTAAGGGTTTGCCTTATATGGACATGGTCTCATCAGTTGGCTGCCTGTGATTGACTGAAGCTTGGCTGCTTATGATTGGCTGAAACGTGATTATCTGTTACAAAATATATACTCCTAAATTAGGTTTAAATTCCTTTATGGACTAAGTTAGGTCACAGTTCAATATGTAGGAATTTGAAGTATGGAG	GT	./.
chr13	24055063	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGCCATTATTTCATCAAGTAATCTTTCTGAAACTTTCTCTCACCTCTCGTTTTGGCATTCCATTATGCATATGTTGATATATTTAATAGTGTCCCACAAGTCTCTAATCATTTTTCTGCCTGTTTTTTCTTTCTGTTCCTCAATGACAGTGGTCTGTGATGTCTGAAGCATCCATCTCTACTCTCAGATTACTAT	GT	./.
chr13	27046707	N	N	<TRA>	13.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TATACATGTATATATATATATATGCATTTATAAATGTATATATGCATGTATATATGTATACATGCATGTATAAATGTATACATGCATGTATATATGTATATATGTATATATTTATGTACACATGTATATATGTATATATTTATGTACACATGTATACATGCATGTGTATATATTTATGTACACATGTATACATGC	GT	./.
chr13	45957375	N	N	<TRA>	35.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGCATACGAGGTCTGATCGTGACTCGAGTTCAGACGTGTGCTCTTCCGATCTTGGGGGGAGGTACACCCCGCGAGGCGGGGACGGAGAGTCAGCCCCTCTTCCCCCACTGGCTCTTGGGACCCCCATCGCGGATCCTAAGATCCTTAGGACAGATCGGAAGAGCGTCGTGTAGGGACAGAGTGTAGATCTCGGTG	GT	./.
chr13	45957408	N	N	<TRA>	35.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGCATACGAGGTCTGATCGTGACTCGAGTTCAGACGTGTGCTCTTCCGATCTTGGGGGGAGGTACACCCCGCGAGGCGGGGACGGAGAGTCAGCCCCTCTTCCCCCACTGGCTCTTGGGACCCCCATCGCGGATCCTAAGATCCTTAGGACAGATCGGAAGAGCGTCGTGTAGGGACAGAGTGTAGATCTCGGTG	GT	./.
chr13	70260237	N	N	<TRA>	3	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GACTGGCGTGGGGCGCTAGGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATGTGTGTGTGTATGTATATATGTGTGTGTGTATGTATATATGTGTGTGTGTGTATATATACACACACACACATATATACACACACACACACACATATACACACACACACACATA	GT	./.
chr13	78420515	N	N	<TRA>	0.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTAGCCTCTCACTCACTCACTCTCTAAAAATACCCTAACATTTTTGGACTGCGGTTCGGTTCACTCGGTAACTGAAATCACAGAAAGTGAAACTGCAGATAAGGGGAGATTGTTACAGAGTATCAGTTGGGGAAGATGAAAAAATTCTTGAGATCTATAGTAGTGATGGTTGCTCATGTACATTGAGCAGCAAAT	GT	./.
chr13	78420555	N	N	<TRA>	0.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTAGCCTCTCACTCACTCACTCTCTAAAAATACCCTAACATTTTTGGACTGCGGTTCGGTTCACTCGGTAACTGAAATCACAGAAAGTGAAACTGCAGATAAGGGGAGATTGTTACAGAGTATCAGTTGGGGAAGATGAAAAAATTCTTGAGATCTATAGTAGTGATGGTTGCTCATGTACATTGAGCAGCAAAT	GT	./.
chr13	81281913	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCGGGGCTCTTCCGATCTGAGGCGGGGGCTGAGAGCCAGCTCCTCGGCCCCCCCTGGCTCTTAGGACCCCATCGCAGGAAGGGGATGCACCCCCCGCGAGGCCGGGACTGAGAGGATGCGCCTCTTCCCCCCCTGTGTCTTGGGACCCCCATCGCAGGGGGGGGAGGCACTCCCCGCGAGGCGGGGACTGAGAGA	GT	./.
chr13	82000293	N	N	<TRA>	44	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAATAATGCAGATCAATTCTTTACATTTTCCCATAAAGTATTTATCAACTCCATCTTCCTTTGTGGAGTGTCTCTATTTCTGTTCTGCTTTTTCAATTTTGACTCATTGTTTTTTTCTGATTTTTTGTGTTTTTTTTTTTTTTTTTTCTTTTTCATTCTTTGTCCCCATTTCTTCTTCCTCCTTTTTAATTTCAT	GT	./.
chr13	100115285	N	N	<TRA>	41.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTGGATAAATGGGTAGCTGGGTGGATGGGTGGGTGGGGTGGGTGGATGATGCATGGATGAATGGATGGATGGATAGATGAATGGATGAATGGATGGATGGATACATGGGTGGATGGATAAATGGATGGACGAATGGAGGATGGATGGATGGATGGATGGATGGATGGATGGATGGACAGGTGGATGGATGGATGG	GT	./.
chr14	20974785	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGACGTGTGCTCTCCGGACGCCGGCCCGCCCCGGGGGGGAGGGGGGGGGTTCTGTCAAGCAGAAGACGGCCTACGCGATCTGGTCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCGCCGCCCAGTCCGGGAGGGAGGTGGGGGGATCAAGATCGGAAGAGCGTCGTGGAGGGGAAGAGTGTAGATCTCGGTG	GT	./.
chr14	21480704	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAACATGGTAAAACCCTCTCTCTACAAACATACAAACATTAACCAGTTGTGGTGATGTACACCTGTATTCCCAGCTACTAGGGAGGCTGAGGTGAGAGGATTGTTTGAGCCTGGGAGGCCAAGATTGCAGTGAGCTGAAATCACACCACTGCGTTTCCATGTGGGCAACAAAGTGAGACCCTGACTCAAAAAATA	GT	./.
chr14	33214739	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTCTCTTTCTGTTTCTCTCTCTCCGTCTCTGTCTTTCTCTGACTGTCTCTCTCTTTCCTTCTCTCTGTCTCTCTCTGCCTGTCTCTCTCCCTCTGTCTTCTTTCTTTCTCTCTCTCTCTTCCTTTCTGTCTCTCTCTCTCTCTCTCTCTGTCTGTCTCTCTCACTGTGTGTGTCTCTCTTCTGTCTTCCTCTCCT	GT	./.
chr14	65712014	N	N	<TRA>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCAGCACACGCCACCGTGCCCAGCTAATTTATGTTTTGTTTTGTATAGACAGGGTCTTGTTATATTGCCCAGGCGTCTCGAACTCCCGGACTCAAGCGATCCGCCCGCCTTGGCCTCCCAAGTAGCAGGGATTACAGGCACCGGCCACCACGCCCAGCTAATT	GT	./.
chr14	70198809	N	N	<TRA>	37.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTAGGGCGAACGGCTGGATGGATGGAGGGATGGATGGATGGGTGGATGGGAGGAAGGATGGATGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGAGAGATGGATGGATGGATGGATGGACAGAAGGATGGATGGGTGGGGAGATGGATGGATGGATGGATGGATGGATGGATGGATAGAGAGAA	GT	./.
chr14	73014659	4788156	T	<INS>	1348	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=73014660;CIPOS=-13,22;CIEND=-13,22;SVLEN=94;RT=0,24,0;GAP=94;MAPQ=55,55;PID=1.78,3.42;PLENGTH=0.998,0.995;RLENGTH=12718	GT:DR:DV:GQ:HR:PL	1/1:2,2:23,23:92:0,1:1348,92,0
chr14	73014713	4788157	C	<INS>	1437	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=73014714;CIPOS=-17,6;CIEND=-17,6;SVLEN=93;RT=0,25,0;GAP=93;MAPQ=53,53;PID=3.191,1.92;PLENGTH=0.489,0.994;RLENGTH=8638	GT:DR:DV:GQ:HR:PL	1/1:2,2:25,25:99:0,0:1437,99,0
chr14	73014744	4788158	C	<INS>	1082	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=73014745;CIPOS=-14,3;CIEND=-14,3;SVLEN=88;RT=0,19,0;GAP=88;MAPQ=53,53;PID=1.726,2.428;PLENGTH=0.999,0.988;RLENGTH=7066	GT:DR:DV:GQ:HR:PL	1/1:2,2:19,19:69:0,0:1082,69,0
chr14	89791698	.	N	<INV>	7	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCAACCCCAACAACACCATAACCACCCCAAACACCACCATCACCCCCAACACCACCACCACGACCACCACCAACACCACCACCACTACCCCCCCCACCACCATCATCACTCCCAACAACACCATCACTACCTCCACCACCACCACCATCATCGCTCCCAACAACACCATCACTACCTCCCCCATCACCATCATCA	GT	./.
chr14	104435133	N	N	<TRA>	30	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATAAAGTAGCTTGGCCGGGGGCGGTGGCTCACGCCTATAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACCAGGTCAGGAGATTGAGACCATCTTGGCTAACACGATGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCATGGTGGCGG	GT	./.
chr14	106056502	.	N	<DUP>	30	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAGCTTAGTCCAGCTCAGCCCAGGTCAACCCAGCCCAGGCCAGCTCAGTACAGCTCAGCCCAGCCCAGGCCAGCTTAGTACAGCTCAGCCCAGCCCAGCTCAGCCTGGCCCAGCCCAGCTCAGTACAGCTCAGCTCAGCTCAGCCCAGCCCAGCCCAGCCCAGCCCAGCGCACCGCAGCGCAGCGCAGCCGAGCC	GT	./.
chr14	106333530	4791275	T	<INS>	128	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=106333531;CIPOS=-8,7;CIEND=-8,7;SVLEN=124;RT=0,6,0;GAP=124;MAPQ=44,44;PID=2.351,5.652;PLENGTH=0.98,0.932;RLENGTH=7155	GT:DR:DV:GQ:HR:PL	0/1:34,31:6,6:128:0,0:128,0,423
chr14	106333574	4791277	C	<INS>	59	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=106333575;CIPOS=-4,4;CIEND=-4,4;SVLEN=136;RT=0,4,0;GAP=136;MAPQ=52,52;PID=2.588,14.381;PLENGTH=0.997,0.184;RLENGTH=7400	GT:DR:DV:GQ:HR:PL	0/1:26,26:4,4:59:0,0:59,0,342
chr14	106333611	4791278	A	<INS>	689	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=106333612;CIPOS=-19,14;CIEND=-19,14;SVLEN=145;RT=0,15,0;GAP=145;MAPQ=45,45;PID=6.018,4.74;PLENGTH=0.966,1;RLENGTH=3982	GT:DR:DV:GQ:HR:PL	0/1:20,20:15,15:202:0,0:689,0,202
chr14	106333644	4791279	T	<INS>	613	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=106333645;CIPOS=-8,24;CIEND=-8,24;SVLEN=119;RT=0,14,0;GAP=119;MAPQ=48,47;PID=2.264,11.974;PLENGTH=1.302,0.42;RLENGTH=3532	GT:DR:DV:GQ:HR:PL	0/1:19,19:13,13:196:0,1:613,0,196
chr14	106333689	4791280	C	<INS>	182	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=106333690;CIPOS=-8,14;CIEND=-8,14;SVLEN=112;RT=0,6,0;GAP=112;MAPQ=47,47;PID=3.5,31.578;PLENGTH=0.996,0.359;RLENGTH=4718	GT:DR:DV:GQ:HR:PL	0/1:24,23:6,6:182:0,0:182,0,297
chr14	106333727	4791281	A	<INS>	341	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=106333728;CIPOS=-12,13;CIEND=-12,13;SVLEN=115;RT=0,9,0;GAP=115;MAPQ=51,51;PID=2.717,6.815;PLENGTH=1,0.3;RLENGTH=4078	GT:DR:DV:GQ:HR:PL	0/1:24,24:9,9:289:0,0:341,0,289
chr14	106333816	4791283	C	<INS>	467	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=106333817;CIPOS=-31,32;CIEND=-31,32;SVLEN=92;RT=0,13,0;GAP=92;MAPQ=53,53;PID=5.683,4.575;PLENGTH=0.545,0.263;RLENGTH=4571	GT:DR:DV:GQ:HR:PL	0/1:39,39:13,13:467:0,0:467,0,478
chr15	20310356	.	N	<INV>	2	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCCCCCCGAACCCCGCCACCCCACCAAGCCGCCGCAGCCCCCAACCCCAGCCAGCCAGCCATGCCAGCCACGCCAGCCAGCCAGCCAAGGCACCCACACCACCCAGCCAGCCAAGCCAGCAAAGCCAGCCAGCCAGCCAAGCCAGCCAAGCCAGCCAAGCCAGCCAAGCCACCCAGCCAGCCAAGCCACCCAA	GT	./.
chr15	20310484	.	N	<INV>	2	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCCCCCCGAACCCCGCCACCCCACCAAGCCGCCGCAGCCCCCAACCCCAGCCAGCCAGCCATGCCAGCCACGCCAGCCAGCCAGCCAAGGCACCCACACCACCCAGCCAGCCAAGCCAGCAAAGCCAGCCAGCCAGCCAAGCCAGCCAAGCCAGCCAAGCCAGCCAAGCCACCCAGCCAGCCAAGCCACCCAA	GT	./.
chr15	20311029	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGCTGGGGTGGCGTGGCTGGCTGGCTGGCTTGGCTGGATGGGTGGCTTGGCTGGGTTGGCGGGCTGGCTGGCTTGGCTGGCTTGGCTGGCTTGGATGGCTGGCTGGCTTGGCTTGCTTGGCTGTCTGGGTGGCTTGGCTGGCTGGCTGGCTGGCTTGGCTGGCTGGGTGGCTTGGTTGGCTTGGGTGGCTGGCCG	GT	./.
chr15	20942026	N	N	<TRA>	35	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CACTAGAGATCAATTCAAAGGACTGGCTTTAGCCTCCAGCTACTGAACAGCTTTGGTTAATAAGAAGCACCTGCAGAAGACTAGAAGACAACAGGAAAGGGGTTGTCTAGTGTTTTTTTCTCTGTGTTGTCTTTTTTTTTTTTTCTTTTTAGAATTCCGTGTAAACAAAATCACGCAGTATTTAGCCTTTTTGTT	GT	./.
chr15	21356394	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAGCAGAAGACGGCATACGAGATCTGATCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTTGAACCTGCACTGGCCTGACCTTGGCTCTGGCCCTGCTCTGCCTTGTTCCTGGCCCTGACCCAGACCCAGACCCTTTCCTGGCTCTGCAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG	GT	./.
chr15	22827082	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGACCCCCCCCCCCTCTGGCCACGTGACGCTTACGCAGTCCCCCCCAGCTCCTCATGACACGGCGGGCTCCGAGGTCTACACTCTCCCCCAGCACCTCGCGCCAGGGGGGGTTATGATGGCCCCACAGCACCTCTGGCCAGGTGGGATTATGACTCCCCCAGCACCTCTGGCCAGCTGGGGTTATGATACCCCCC	GT	./.
chr15	23685607	N	N	<TRA>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAATATGCATTTGTTTGGACGCGGGACGGAAGCACTGGTTTGGTGGAATGAGGAGGGGGCATTCAGCCCCTAAAGTGGACCTTGGAGTAGGGGACCCTGAGAGTGGAGCTTCCTGCTCCCACATCTTCTCCTCCTGCTCCTGCATCTTCTCTTCCTGCTCCTGCATCTTCTCCTCCTGCTCCCGCATCATCTCCT	GT	./.
chr15	23706879	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCGGGAGGAGGAGGGGAAGATGCAGGAGGAGGAAGAGAAGATGCAGGAGCAGGAGGAGAAGATGTGGGAGCAGGAAGCTCCACTCTCAGGGTCCCCTACTCCAAGGTCCACTTTAGGGGCTGAATGCCCCCTCCTCATTCCACCAAACCAGTGCTTCCGTCCCGTGTCCAAACAAATGCATATTTCCAAGCCCTG	GT	./.
chr15	23707587	4943340	G	<INS>	9999	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=23707588;CIPOS=-15,43;CIEND=-15,43;SVLEN=401;RT=0,79,0;GAP=401;MAPQ=51,51;PID=3.161,2.951;PLENGTH=0.743,0.99;RLENGTH=4991	GT:DR:DV:GQ:HR:PL	1/1:28,28:79,79:12:0,0:9999,12,0
chr15	23717166	N	N	<TRA>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCTCCATGTTGGTAAGGCTGGTCTCAATATCCTGACCTCAGGTTATCCGCTCTCTTCGGCCTCCCGGGGTGCTGGGATCGCAGGCGTGAGCCACCGCGCTCAGGCCAATTTATTAATCAGACAGGAATAGGTCGGCCTGGTGTTTTACATACATCAGTTAGCTCAAGTTCACTGATGATGTTGGTCAAACTTTC	GT	./.
chr15	23831661	.	N	<INV>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TAATTTACATTCCCACCAACTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTCCCGGATTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAGTTTTTTGTA	GT	./.
chr15	36813690	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAACAAAGAGAGAGAAAGAAAGAGAGAAAAAAAGAGGAACGGAGGGAAAGAGAGAAAGAAAGAGAGAGAGAGACAGACACACAGACAGGCAGGCAGGCAAGGAAACAGAGTAAGACAGAAGATAGGAACAGAGAGAGAGAGAGAGAGACAGAGAGACGCAGAAAAAGAAAGAGAGAGGCAGACAGACAGAGAAAG	GT	./.
chr15	41621292	.	N	<DUP>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TATACTAAATATACTATATTTATACCGGTATAATATACTAAATATGCTATATTTATACCGGTATAAATATACTAATATACTATATTATACTGGTATAAATATACTAAATATACTATATTATACCAGTATAAATATAAATATACTAAATATACTATATTTTTATGTATACTAGTATATTTGTACTAGTAAAATTTA	GT	./.
chr15	53807277	N	N	<TRA>	31.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGAAACTCAACAGCAAGTCAAAGAATCAAGGCTTGCAAATGAAAATATGATATTCCTTTGGGGGATATGCCATATATATATATATATACACACATATATATGTGTATATATATGTTTGTATATATATACACACATATATATGTGTATATATATATACATATATATGTGTGTATATATATACACACATATATGTTT	GT	./.
chr15	69256821	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGACGTGTGCTCTCCGGACGCCGGCCCGCCCCGGGGGGGAGGGGGGGGGTTCTGTCAAGCAGAAGACGGCCTACGCGATCTGGTCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCGCCGCCCAGTCCGGGAGGGAGGTGGGGGGATCAAGATCGGAAGAGCGTCGTGGAGGGGAAGAGTGTAGATCTCGGTG	GT	./.
chr15	71491784	N	N	<TRA>	8	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCACACACACAACAAACAGAGCAACCACCCACAACACACACACACCACACACACACCCCCCCCATACACCACACACACACCACACACACACCACATCACACACACATACACCACACAGACCCACATACATACCACACACATACACACCACACGCACACAACACACACACACCACACACACACCCCCCCCCAAACA	GT	./.
chr15	72501803	N	N	<TRA>	30.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTGAAACATACAGTAAAACCTACTTTGTGTGAGGGAAGCTAATACAGGCAAACGATATATATGTGTGTGTGTGTGTGTATACACATATATGTATATATACACATATGTGTATATATACATATATGTATATATACATATATATATATATATACATATATATATATATATATAAGATCGGAAGAGCATCGTGTAGGG	GT	./.
chr15	78135274	N	N	<TRA>	9.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCAGTTACTTGGGAGGCCGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTACAGTGAGCCAATAGCGTGCCATTGCACTCCAGACTGGGCAACAAGAGTGACACTAAGTCTAAAAAATAAAATTAAAATTAAAAAAGAAAGTTATAAGGGGCTTACATTTTATAACTCAACAAGAAAAGCCAAAGTAT	GT	./.
chr15	84810725	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCGGCCAGCCTCGGACATCCGCGTGTTCGCCAGCAACTGCTCGATGCACGGGCTGGGCCACGTCTTCGGGCCAGGCAGCCTGAGCCTGCGCCGGGGGATGTGGGCAGCGGCCGTGGTCCTGTCAGTGGCCACCTTCCTCTACCAGGTGGCTGAGAGGGTGCGCTACTACAGGGAGTTCCACCACCAGACTGCCCT	GT	./.
chr15	90312008	N	N	<TRA>	32.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTCACCAGCCTCCCTAAGCTGGGATTTGTCCCCATCCCTCATGAACAGTGGCCTCCAGTTCTCACCACTTACTTTAGGTAGGGCCCATCCTGTCTGGAGAATAAGGAACCATCACCATCACTCCTCAGTTGAAGACCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCTTTGGTTTTTTTTTTTTTTTTTTTTTTTT	GT	./.
chr15	94595141	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CACACATATACATACACACCATACACACACATATATACACACTACACACACACCACACACACATACACATATACATACACATCACACATATATACACACTACACACACACACCACACCACACATACATACACATATACATACACACCACACACACATACACATACACACCACACACAAACATACACACCACACAC	GT	./.
chr15	94595182	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CACACATATACATACACACCATACACACACATATATACACACTACACACACACCACACACACATACACATATACATACACATCACACATATATACACACTACACACACACACCACACCACACATACATACACATATACATACACACCACACACACATACACATACACACCACACACAAACATACACACCACACAC	GT	./.
chr16	4635313	N	N	<TRA>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCAGGTTTGATGGCTCTTGTAATCCCAGCACTTTGGGAGGCTGATGGGGGAGGATCCTTTGAGCCTAGGAGTTCCAGATCAGCCTGAGGCAACATAGTGAGACCCCTGTCTCTACAAAAAAAAAAAAAAAAAAAAAAATCCAGGGAGGGGGCCAAAGACAAACACTGGCAACCCATAATTCTGTATCCTGAAATA	GT	./.
chr16	7733013	N	N	<TRA>	32	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACTACAGAGAACATAAGTAGAAAATAGAATTATATTATTTATCTTATTTTTTTTTAGAATATATAATAACCATCACTTTAAGAGGAGCACTGTTTTTTATATATATATATATATATATATATATATATATACACACACATATATACGTATATATGTGTGTGTATATATATATATATATATATATATATATATAAA	GT	./.
chr16	7733110	N	N	<TRA>	23	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACTACAGAGAACATAAGTAGAAAATAGAATTATATTATTTATCTTATTTTTTTTTAGAATATATAATAACCATCACTTTAAGAGGAGCACTGTTTTTTATATATATATATATATATATATATATATATATACACACACATATATACGTATATATGTGTGTGTATATATATATATATATATATATATATATATAAA	GT	./.
chr16	15488839	.	N	<INV>	30	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTGGAGTGCAGTGGGGCGATCTTGGCTCACTTCAAGCTCCACCTCCTGGGTTCAGGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCAGTAGCTGAGACTATCAGTGCGCACCACCAAGCCTGAGTAATTACAATACTTTTTTCTTTTTCCTTTT;SVTYPE=INV;CHR2=16;END=28636073;SVLEN=13	GT	./.
chr16	19444258	N	N	<TRA>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCACATATAACATCCATCTTTCTATCTATCTATCATCTATCTACCCATCTGTCTATTTATCTGTCTATCTAATCTATGTGTGTTTTTGTATGTGTGTTCTATGAATGTGTATATATAATGTATATTATATGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAGTATTTTTCTTTTCTTTTTTTCAGCTTTTT	GT	./.
chr16	20754044	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGTTATTGAAAAACAACAGACAATGGCAAAAACAAATTGACCTTTTTGTGTTCCTTTGTGCATGGACGAATGGCTGACTCTGGAGCCCAGGCTGTTGCTTCTCGGTCTGGTGATCAATCTTCCATAGTCTATCTATATATATATATATATATACATATGTATACACATTTTTTTCCTTCTCCCCTTTCCCATTGT	GT	./.
chr16	32295379	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCACTTCATCATTTCGTTTCATCATTTCATTTCCTCATTTCATCATTTCATTTCATCCTTTCATTTCATCTCATCATTTCATCCTTTCATTTCATTCTTTCATTTCATTATTTCATCTCATCATTTCATCTCATCATTTCATTTCATCATTTCATCTTTTCATGTCATTTCATCATTTCATCTTTTCATTTCATT	GT	./.
chr16	32295510	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCACTTCATCATTTCGTTTCATCATTTCATTTCCTCATTTCATCATTTCATTTCATCCTTTCATTTCATCTCATCATTTCATCCTTTCATTTCATTCTTTCATTTCATTATTTCATCTCATCATTTCATCTCATCATTTCATTTCATCATTTCATCTTTTCATGTCATTTCATCATTTCATCTTTTCATTTCATT	GT	./.
chr16	32344157	.	N	<DEL>	3	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCTCTCATCTTTTTTAATGATACGGCGACCACCGCGATCTACACTCTCTCCCTACACGACGCTCTTCCGATCTTCATCTCATCTCATCATTTCTTCTCATCATTGCATCTCATCATTCATCTCATCATTTCATCTCATCTCATCATTTCATCTCATCATTGCATCTCATCATTCATCTCATCATTTCATCTCAT	GT	./.
chr16	33873030	.	N	<INV>	2.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGATTCCCTTCGAGTCCATTTGATGATTCCATTCGATTCCATTCGATAATGATTACATCCGAGTCCATTAGATGATTCCATTTGAGCCCATTCGATCATTCCATTTGAGTCCAACCAATGATTCCATTCATTTCCATTCAATGATTCCATTCGAGTCCATTTGATCATTCCGGTAGGGTCCATTCGATGTTGATT	GT	./.
chr16	33876810	.	N	<DEL>	3	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATCATCATCAAACGTAATTGAAAGGAATCATCATTGAACGGAATGGAATGGAATCATTGTTGAACGGAATCAAATGGAATCATGATCGAAGGGAATCGAATGGAATCATCATCGAACTGAATAGAATTTAAACATCTTTGAACAGAATCGAATGGAATTATCATCGAATGGAATCAAATGGAATCATCATCGAAC	GT	./.
chr16	33886922	.	N	<INV>	0.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATCATCAATGGAATTGAATGAAATCAAACTCAAATGGATTCCAAAGGAATCATCTTCGAATGGAATCAAATGGAATCATCGAATGCAATGGAATGGAATCATCATTGAAAGTAATCGAAGTGAATCATTGAATGGAATCGAATTGAGTCATCGAATTGAATCGAATGGAATCATCACCGAATGGACTCGAATGGA	GT	./.
chr16	33889009	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGAATCATCGAATGGAATGCAATGGATTAATCCATGGACTCGAATTCAATCACCATCGAATACAATCGAATGGAGTCATCGAATCGACTCAAGTGGAATAATCATTGAATGGAATCGAATGGAATCATCGAGTGGAATCGAATGGAATCATCATCGAATCGACTTGAATGCAACTATGAGCGAATGGAATTGAAT	GT	./.
chr16	33890183	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCTACGTCTTGATGATTCCATTCTATTCCATCCGATGATTCCATTATCTTCTATTTTATGTTGATCCCATTCAATTCCATCTGATGATTCCATTCGATTCCATTTGATGATGATTCCATTCGATTCCATTCAATGATTCCATTCGATTCCATTAGATGATTCCATTCGAGAGATCGGAAGAGCGTCGTGTAGGGA	GT	./.
chr16	33961440	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GATCGTGCCTGTCCTGCGCATCTGCACCGTCCGTGCCGTTCCTGGCACAGCAGCGCGCCCCCCCCCCGCCCGCCACCCTGGGCTTTTTTTTTTTTAATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTCGTGCCGAGTCGTGACCGGTGCCGACGACCGCGTTTGCGTGG	GT	./.
chr16	33998312	.	N	<INV>	2	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTTTGTTTATGTGAAGATATTTGCTTTTCCACTATAGGGTGAAACAGGGCTCCAAGTATCAACTTGCAGATTCTGCAAAAAGGAGATTCAAAACAGCTAAATCCAAAGATTACTTCAACTATGTGAGTTGAATGCACACACAAAAAAGAAGTTTCTCAGAATGCCTCTGGGTACGTTGTCTGCGAAGATATACGC	GT	./.
chr16	34187384	.	N	<DUP>	49.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCTATTCAATGATGTTTCCACTTGATTCCATTCGAACATGATTGCCTTTGATTCCATTCAATGATTCCATACGGTTCCATTTGATGATGATTCCATTCGAGTGCATTAGATGATTCCATTCGAGTCCATTCGATGATTCCATTCGATTCCATTCGGTGATGATTCCTTTGGATTCCATTTGATTATTATTTCCT	GT	./.
chr16	34191457	.	N	<INV>	11.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GATGATGATTCCATTGATTTCGTTTGATGATTCGATTCCATTCCATTCGATGATGATTCCATTCGAGTCCATTTGATTCCATTCAATTCCATTAGATGATGACTCCGTTCAAGTCCATTCGAAGATTCAATGCAATTTCTTTCGATTAAGATTACATTCGATTCTATTTGATGATTCCATTTGATTCTATTTGAT	GT	./.
chr16	34194310	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAATGGCCTCAAATGGAGTCATTGAATGGAATCAAGTAGAATAATAATCAAATAGAATCAAATGGAATAATCAAATGGACTCCAATGGAATCATTGGATGGACTCGAATGAAATCATCGAATGGACTCGAATGGAATCATCATCGAATGGAATGGAATGGAAACATTGAATGGAATCCAATAGAATCATCATCAA	GT	./.
chr16	34194361	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGCAGAAGACGGCATACGAGATCTGATCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTCAATGGAATCATTGAATAGAATCGAATGTATTCATCATCAAAAGAAATCACATTGAATTATCGAGTGGACTCGAATGGAATCATCATTGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG	GT	./.
chr16	34194362	.	N	<INV>	0.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGAATGGAACAATCAAATGGACTCCAATGGAATCATCTAAAGGAATCGAGTGGAATCATCGAATGGACTCGAATGGAGTCATCATGAAATGAAATCGGATGGAATCAAGGAAGGGAAGCAAATGGAATCAGGGAATGGAATCGAATGGAATCATCGAATGGACTCTAATGGAATCTTCGAATGGACTCAAATAGA	GT	./.
chr16	34194401	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGCAGAAGACGGCATACGAGATCTGATCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTCAATGGAATCATTGAATAGAATCGAATGTATTCATCATCAAAAGAAATCACATTGAATTATCGAGTGGACTCGAATGGAATCATCATTGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG	GT	./.
chr16	34194516	.	N	<INV>	28.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCGTCTCCTTTCAATGATGATTTCATTCGACTACATACGACGATTCCATATGTTTCCATTTGATGATGATTCCATTCGATTGCATTTGACAATGATTCCATTTGATTATATTCAATGATGATTCCCTTACAATCCATTCGATGATGATTCCATTCGAGTCCATGTGATGATTCCATTCGATTCTATTAGATGAT	GT	./.
chr16	35223081	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAGAAGCATTCTGAGAAACATCCTTGTGAGGTGTGCACTGAAGTCACAGAGTTGAAACTGTCTTTTGATTCAGCAGTTTTGAATCTCTCTTTTTGCAGAATCTGTGAGTGGATATTTGGAGCGCTTTGAGGCCTACTGTGGAAAAGCAAATATCGTCACATAAAAACTTCACAGAAGCATTCTGGGAAACTTCTT	GT	./.
chr16	46397910	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CACTCTTTCCCTACACGACGCTCTTCCGATCTCATTGATTCCATCCGATTTCATTGGATGATGACTCCATTCGAGTCCATTCGATGATTCCACTCGATTCCATTAGATGATTCCATTGGGTTCAATTCAATGATGATTACATTGGATTCCGAGATCGGAAGAGCACACGTCTGAACTCCAGTC;SVTYPE=INV;	GT	./.
chr16	46414617	.	N	<INV>	34.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAATCATCATCGAATGGAATGGAATGGAATCATTGAATGGACACTAAAGGAATCATCACCGAATGGAATTGAATGGAATCTTCGAATGGACTCGATTGAAATCATCATCAAATGCAGTCGAATGGAATCATCATCAAATGGAATCGAATGGAATCAACATCAAATGGAATCAAAAGGAATCATTGAATGGAATCA	GT	./.
chr16	56225668	N	N	<TRA>	1	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGGGGGGGGGGGGCGGGGGAGGGGGGGGGGGCGGGGGCGGGGGAGGAGGCGGAGGAGGTGGAGGAGGCGGCGGCGGCGGAGGAGGAGGAGGAGGCGGCGGCGGAGGAGGAGGAGGCGGCGGCGGAGGAGGAGGAGGAGGAGGCGGCGGAGGAGGAGGAGGAGGCGGCGGAGGAGGAGGCGGCGGCGGAGGAGGA	GT	./.
chr16	56225717	N	N	<TRA>	1	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGGGGGGGGGGGGCGGGGGAGGGGGGGGGGGCGGGGGCGGGGGAGGAGGCGGAGGAGGTGGAGGAGGCGGCGGCGGCGGAGGAGGAGGAGGAGGCGGCGGCGGAGGAGGAGGAGGCGGCGGCGGAGGAGGAGGAGGAGGAGGCGGCGGAGGAGGAGGAGGAGGCGGCGGAGGAGGAGGCGGCGGCGGAGGAGGA	GT	./.
chr16	58624496	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGACCTATAGAAATCTCTGACCCAGCGTAGCAGAAGGTCGAACGCAGCATACATGCTACCTTCGCCCTCCTATATGAATGAGTGAGAGAGACCTGTCCTCCAAAAAAAAAAAAATAGAACAGAGTCTGGGTGCAGTGGCTTACACCTCCAGGCCTCCAGGCCCGGGACAGAGACCACCATGGGTCTCACCCCGC	GT	./.
chr16	58624541	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCTCGGACTACAAAAAAAAAAAAAAATAGAACAGAGTCTGGGTGCAGTGGCTTACCCCTCCAGGCCTCCAGGCCCGGGACAGAGACCACCATGGGTCTCACCCCGCGCTCTACCCTCCGCTTCCTGGAGCCTTCTCGCTGGCCTCTCATCTTCAGAGCGCGAAGCCTCCGAGAGCCGTGTGGAGAAGAGTCCGCC	GT	./.
chr16	58624543	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGAGGTTGCAGTGAGCAGAGATTGCACCACTGCACTCCATCCTGGATGAGGGAGTGAGACTCTGTCTCCAAAAAAAAAAATAGAACAGAGTCTGGGTGCAGTGGCTTACACCTCCAGGCCTCCAGGCCCGGGACAGAGACCACCATGGGTCTCACCCCGCGCTCTACCCTCCGCTTCCTGGAGCCTTCTCGCTGG	GT	./.
chr16	58624545	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCATGATAATAACATGAAAGCTGTCTAAGTTCTTAGCTTATTTCAGTTTCCCTTCTCTTCATTCAGAAAATATGGAAGTTAAGAAAGACCATCTCTACCAAAAAAAATAGCTAGGCATGGTGATATACACCTATAATTTCCAGCTACTTGAGAGGCTGATGTATGAGAATCGCTTGAACCCAGGAGGCGGAGGTT	GT	./.
chr16	78928639	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AACAAATTGATTAATGTGTCGAGGGAGCAAGGTGGTACTTATACCTACCCAGCCTGCTTGTGTGTGTCTCAAGGTGGAGAGAGGCTGTGGAAACAATAGAGAGAATAGCATGGAAGGCCACGTTGCAATTAAACAAGATTGGGTGGCCATGGTGCTCACAGTCTCTCAATCCTTTATGTTGAGGGAGAAATGATA	GT	./.
chr16	85440528	.	N	<DEL>	9	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTCCCCCGGATGATCCTCACTGTTACACTCAGGGCCCCCCGGGATAATCCTCACGGTTCATCTTTTTTTCAAGCAGAAGACGGCATACGAGATCTGATCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTCCCCCGGATAATCCTCACTATTACACTCAGGGCCCCCCTGGATAATCCTCACCGTTACACTC	GT	./.
chr16	89966156	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TACAAAATTTTCCAGGCGTAGTGGTGCATGCCTGTAATCCCTGCTTCTTGAGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGTAGAGATTGTGGTGAACCGAGATCGCGCCATTGCACTCCAGTCTGGGCAATAAGAGTGAAACTCCGTCTCAAAAAAATTAAAAAAGAAAACCCAATATAATAGTGCAG	GT	./.
chr16	90053840	N	N	<TRA>	15.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGAGGATGAGGTGGAGGAAGTGGAGGAGGTGGAGGAGGTGGAGAAAGTGGAGGAGGTGGAGGAGGAGGTGGAGGAGGAAGAGGTGGAGGAGGAGGAGGGAGGGGAGGGAGGGGAGGGGGGGGAGGGGGGGGGGGGGGGGGAGGGAGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	GT	./.
chr17	5964324	N	N	<TRA>	30.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAACAAAAAACCAAACGCTCAGTCGCTACAAACACCAAAATGTGGCTGGGCCCGGTGGCTTACACCTGTAATCCCAGCACTTTGGGAAGCCGAGGCGGGTGGATCACTTGACTGGTCAACAGGGTGATATCTCATCTCTACTAAAAATACAAAACTAGCTGGGCGTGGTGGTGCATGCCTGTACTCCCAGCTACT	GT	./.
chr17	30506307	N	N	<TRA>	30	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGTCTGGGAAGTGAGGAGCACCTCTGCCCGGCCGCCACCCCGTCTGGGAAGTGGGGAGCACCTCTACCTGGCCGCCCCGTCTGGGAAATGGGAAGCGCCTCTGCCCGGCCGCCCCGCCTGGGCAGTGTGGAGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCCCCCCGC	GT	./.
chr17	38916114	N	N	<TRA>	32	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TAATTATAGTTACAATAATTTGTTAAGGAATACACAATATAAACAGATGCAAATTGTGACATCAGAAACATAAAAAATGGGGGTGGAATAAGAGTATAGAGTCTTTAATGTGGTCAGAATTAAGTTGCTATCAGTTTAAAATAGCCTGTTATAAGTGTATTTTATATAAGCCTCATAGTAACCACAAGCAAAAGC	GT	./.
chr17	41384891	N	N	<TRA>	31.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTCTCAACCACACACCCACCCCCACACACACACACCCACACACACACACACACACTTTTTTAATGGTACGGCGACCACCGAGATCTACACTCTCTCCCTACACGCCGCTCTTCCGATCTCACGCCTGTAATTCCAGCACTTTGGGAGGCCAAGGCAGGTGGATCACCTAAGGTCAAGAGATCAAGACCAGCCAGG	GT	./.
chr17	42598156	N	N	<TRA>	59.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGGGTTTCACCATGTTGCTCAGGCTGGTCTCAAACTCCTGGGCTCAAGCAATCTGCCCACCTTGGCCTTCCAAAATGCTAGGATTACAGGCATTAGCCACCACACCAAACCTAGTCTTCTTCTTTTTTTTTTTTTTTTTTAACGGGGTCTCTCTCTTTGTTTCCCCTGCTGGTGGGCAGGGGCGGGATCACTGCA	GT	./.
chr17	43442995	N	N	<TRA>	17.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGTAGGTACATACACCAAAAAAAGTAAAGTAAAAAAAAAATAACGAAAATAAAAAAAGAAAGAAAGCAAGAAGAAAGAAAGAGAAAGAAAAAAAGGCATAAAGAAAGAAGGAAACAAAGAAAGAAAGGAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAAGAAAGAAG	GT	./.
chr17	43443175	N	N	<TRA>	17.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGTAGGTACATACACCAAAAAAAGTAAAGTAAAAAAAAAATAACGAAAATAAAAAAAGAAAGAAAGCAAGAAGAAAGAAAGAGAAAGAAAAAAAGGCATAAAGAAAGAAGGAAACAAAGAAAGAAAGGAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAAGAAAGAAG	GT	./.
chr17	64794712	.	N	<DUP>	30	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGATGATGGGGTGATGGTGCTAGTGGAGATGATGGGGATGATGGTGATGGTGGTGGTGATAGGGGTGGGATGGTAGTGGTGATGTGGGTGATGGTGATTGTGATGGTGGTGGTGGTGGGGGTGGTGGTGGTGGTGATGGTGGTGGTGGTGGTGATGTGGTAGTGTTGTGGTGGTCGTGGTGGTGGTGATGGTGGT	GT	./.
chr17	75550263	N	N	<TRA>	31	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTGCCCTGGTGGGAGACAGGCTTCCTTTCTCTCAGTTTCCTGGATCCTCTTCAATAAAGAGCCCCCCTCCACGGTTCTGCCCCTTACCAATGTTGTTTCTAGCTCCATCCCATCCTTCTACACCCAGAGTGTTGCTTTTTTTTTTTTTTTTTTTTTGCGGAGGCTCACTCCT;SVTYPE=TRA;CHR2=Y;END=	GT	./.
chr17	75857719	N	N	<TRA>	49	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAGGAGGAAGGAAGGAGAGATGGATGGATGGATGGATGGGTGGATGGATGGATGGGTGGATGGACAGATGAATGGATGGGTGGACGGATAGAAGCAAGGAAGAGCATATGGATGGGTGGATGGACCCTTTGCTCAAGATACTCCCTGGAACTGCAGAGAAAGGGGTTAAGCAAGAGGGTGAGGAAAGACTGGTTC	GT	./.
chr18	10691781	N	N	<TRA>	30	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATATATACAATATATATAATATAAAAAAAATATATAAACACACACACACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATATATATATAGAAAGAGAGAGAGAGGATCCATTTGGAATATGTAGGAGAAAGAATTCTGATAGGTGGACTCTCAATTTCTTTTTA	GT	./.
chr18	12933934	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTGATTGTTGTAAATAATAACACGGCTTCTAGCTAGGCACAGTGGTTCATGCCTGTAGTCCCAGAACTTTGGGGGTGCTGAGGCAGGAGGATCGCTTGAGCCCAGGAATTTGAGGCTGCAGTGAGCGATGATTGCATCACTGCACCCACCGCTTCCAGGGCTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAG	GT	./.
chr18	23773548	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGTGCTGGGATTACAGGCTGAGCCACTGCACCTGGTCTTAATGTTCTTTTTTGAAAACGAGGGGAGAGGTTCAGTTTTTGCAGAGGAATGAAAATAGTAGGGGAAGGCCAGGCGTGAGCCACCGTGCCCGGCCTCCTATGAGAATTGTTACTGCCGCCACTGATCTCACAGGTGACAGAGCTCATGTGGTAATGC	GT	./.
chr18	39322354	N	N	<TRA>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTTTTTATGTACAGAACTACACCTACTTCTATACAAATATACTTTCTGAAAAGTTTATTACAGTGAATTGATTTTACTATGGGTACAAAAGATAAGGGGAAAAAATGGAGCTTTTGAGGCAGGGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTCCAGATGGAGTCTTGCTCTGTAGCCCAGGCTGGAGTGCAGT	GT	./.
chr18	41194050	N	N	<TRA>	15	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GATATATATATTATATATCATATATAATATTATATAATATTATATATGATATATATATTATATATATCATATATAATATTATATATATATTTTATATATATAAATATATATATATGATATATATATATATATATATAAAGAAAAACTACAAAACCAATGACATCCAAAATAATTA;SVTYPE=TRA;CHR2=X;E	GT	./.
chr18	41194138	N	N	<TRA>	15	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GATATATATATTATATATCATATATAATATTATATAATATTATATATGATATATATATTATATATATCATATATAATATTATATATATATTTTATATATATAAATATATATATATGATATATATATATATATATATAAAGAAAAACTACAAAACCAATGACATCCAAAATAATTA;SVTYPE=TRA;CHR2=X;E	GT	./.
chr18	43690291	N	N	<TRA>	10.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAGTATGGAGTGAAATGGAACAACCATATCCCCCGGTTCCCTTAACCAGGGGCCAAATAGCCCCCCTCCCCCCCCTCCCGAAGAAAATAGACTACAGGTGTCCCCCCCCCCCACCGGGCAAATTTTTAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGGGGTGGGTTTTTTTTCAAATTTTTAAGGTTTTT	GT	./.
chr18	58832629	N	N	<TRA>	54	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CACTAATTTGTTTCACATTGAAGTGGTACATGCTGTGTGTTTATGCCATTACTAGAGCCAACACTGAAATATCATTTGATATGTATCTGAAGCCTTCTATCAGGCTCCAAGATAAGAAAGAGGCAGTTTTTTTTTTTTTTTTTTTTTGTGACAGTCTTGCTCTGTCGCCTTGGGTGGAGGTCAGGGGCGTGGTCT	GT	./.
chr18	65084575	N	N	<TRA>	30.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAAAAGTAAATCATCACTATCTTCACATAATAGAGCATCGAGGTAATTGAAGAATTTCCCTGGTCTTAGCAATTATGGCATCATTGATTGTATCATTTTGATGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAATTCTTTCTTTCTTTTTTTTTTTTTTTTGTTTTTTTGATGCTTTTTTGTTGCCCA;SVTY	GT	./.
chr18	66379462	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTTAAGGTAACTGAACAGGAAACAAAGGTGGTCTTGTAGGGCCTAGACAGTGTGGCCCAAGTCATTGGAACACATAGGAATGGCTAAGCGAAACCCAGAGACATGTCAGCTGCAATCAGCTTTAATGCATTTTTGCCAAAGTAAGGATTGCCTCTTTAAAAACTTTCTCTTGAAACTTGAGAACATGAAGTTAAG	GT	./.
chr19	1164457	N	N	<TRA>	15	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGACTGCGCCAGGACAAAGCCTCCCCCGGGCACAGGAACAGGTGCTAGGACACTGTGGGGACGTCCCAGATGCCAGGGGGAGTGGAGACAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAACAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGGGGAGGAGGAGA	GT	./.
chr19	10298694	N	N	<TRA>	30	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTTGTGGTCCTAGCTACTCAGGAGACTGAGGCAGGAGGATCACTAGAGCCCAGTGAGCTATAATTGTGCCGCTGCATTCCAGCCTGGGTGACAGAGCGAGACTCCATCTCAAAAAGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACGAT;SVTYPE	GT	./.
chr19	11575904	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CACACATATACATACACACCATACACACACATATATACACACTACACACACACCACACACACATACACATATACATACACATCACACATATATACACACTACACACACACACCACACCACACATACATACACATATACATACACACCACACACACATACACATACACACCACACACAAACATACACACCACACAC	GT	./.
chr19	16112060	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATTTCAGAAGTGCTTCAAGGAAGTGATGAAAGCCCTAGGCAGTTTTATGAAAGATTCTGTGAGGCATACTGGCTTTCACCCCGTTTGACCCTGAGGCCACTGAAAATCAGTGTATAATGAATATGTCATTTGTAGGACAGGCCCAAGGTGATATCAAATGAAATCTTCAGAAGTTAGAAAGTTTTGGCCGGGTGC	GT	./.
chr19	17396811	N	N	<TRA>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TAGACATGGGTTCAAGATATGTTGTGACTTTAAGGACTGCCTCTGGGGACCACTGTATCCACTTTTCCCTGTCTGAGCTATCCCCTTCATCCAGGGAGACTCAGGACCTGCCAGCCCGAGCCTTCTCACTGACCCCAGCTGAGCGCCTTCAGACTTTCATCCGTGCCATCTTCTACGTGGGCAAAGGGACGAGGG	GT	./.
chr19	17397640	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GATGCCCGTAAAGTGCTTGTTATTATGGAAATGTTTCATGCGTGACCATCAGCAATGTCAAGACATGAGAGATTATGTTCCCAAGAAGGCGTTATTAGTTTGAGTTTAATTTGGTTTATTGGGCAGTACACTTAAAGCACAGGAGAAGGTGCTTTGGAACAGTCCGGTGCTTCTGTAAGAGGCGTTTGAACCTGG	GT	./.
chr19	20420783	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGCCAACTTTTTGTATTTTTAATAGAGATGGGGTTTCAGCATATTGGTCAGGCCAGTCTTGAACTC;SVTYPE=TRA;C	GT	./.
chr19	20751038	.	N	<INV>	2	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCACTGGAGGTAGAAAGAGAACACAGCCTTTGAGCAAGCTAAGCAAGCAGTGCATCTGGCCCTGGATGGCCCATATGGGATGGGCCAGTAGAATTGCAAACAACTGTCCTGGATTAACATGCTAATTGGAGCCTTGGGCAGAAACAAGATGGGAAGAGGGGACTCTTGGGGTTTCAAACCCGGAAGCTGCCAGAG	GT	./.
chr19	24531112	.	N	<DEL>	3	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAATATATACACATGAAAACTAGACAGAAACATTATGAGAAACTGCTCTGTGATGCGGGCATTCATCACCAGAGTTGAACCTTTCTTTTGATTGAACAGTTTTGAAACATTCTTTCTGTAGAATCTGAAGGGGATATTTGGAGCGCTTTGCAGTTTTTGGTGGAAAAGGATATATCTTCACATAAAAAATAAACA	GT	./.
chr19	24599941	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGATCAATGCACACATCACAAAGAAGTTTCTCAGAATGCTTCTGTATAGTTTTTATCTGAAGTTATTTGCTTTTCCACGATAGGCCTCAAAGCACGCCAAATATCCACTTGCAGATCCTATGAAAAGAGTGTTCCAAAACTGGTCAATCATAAGATAGGTTTAACTCTGTGAGTTGAATGCACAATCACGAGGA	GT	./.
chr19	27764756	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TACACGACGCTCTGCCGATCTTACCTTTTCATAGAACAGCTTTGAAACATACTTTTCGTAGAATCTGCAAGTGGGTGTTTGGACTGCTTGGAGGCCTTCATTGGAAATGGGAATGTCTTCACATATAAGCTAGACAGATTCATTCTCAGAAACTTCTATGAGATGTCTGCTTTCAACTCACAGAGTTGTACCTTT	GT	./.
chr19	28306585	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGCCTCCACCACTATGCAGATAGAAAAAAGTCTTAGGAAAGTGACATAACATCCAGAATTACACAGAGATTCCATGGCAAAGCTAGCACTTTAGTTAGGATTACATTTTCCTACATATAGAAGAAAACCCAGACCGGGTGCTGTAGTTCACGCCTGTTATCCCAACACATTGGGAGGTTGAGGCAGACGGATCAC	GT	./.
chr19	32576039	N	N	<TRA>	3	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCATCCACCCATCCACCCATCCATCCCTCCCTCCACCCACCCCCCCATCCATCCATCCATCCACCCATCCACCCACCCACCTATCCATCCGCCTATTCATCCATCCAACCATCTGTTCATCCATTCATCCATCCATCCATCCATCCACCATCCATCCATCCACATCCATCCATTCATACATCCATCATCCTCC	GT	./.
chr19	32576158	N	N	<TRA>	3	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCATCCACCCATCCACCCATCCATCCCTCCCTCCACCCACCCCCCCATCCATCCATCCATCCACCCATCCACCCACCCACCTATCCATCCGCCTATTCATCCATCCAACCATCTGTTCATCCATTCATCCATCCATCCATCCATCCACCATCCATCCATCCACATCCATCCATTCATACATCCATCATCCTCC	GT	./.
chr19	33516902	N	N	<TRA>	40.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTTTGCGTGTCTATGAAATGTGACTACGCGGAATTACTGAAAATTAACTATAAAATCCAAGGCATCTAACTTTTAAACTTATCTTGGCTCATCACGTATATTTACACTAGATTTTATACTGTGTTCATTTGTTTTTTTTTTTTTTTTTTTTTTTGGACGGAGGCTCCCTCTGTCCCCCCGGCTGGCGTGCAGTGG	GT	./.
chr19	39942466	N	N	<TRA>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGTACAGGTGCCCACCACCGTGCTGGGCTAGCTTTTGTATTTTTAGTAAAGACGGGGTTTCACCACATTGGCTAGGCGGGTCTTGTACTCCTGATGTCAGGTGATCCACCCGCTTTGGCCTCCTAAAGTGTTGGGATTACAGGCATGAGCCACTGCACCCGGCCAAGATACCCCTTCTCTGACCGCTCCGGGCT	GT	./.
chr19	41333402	INV00052906	N	<INV>	.	.	AC=15;AN=5040;CHR2=19;CIEND=-194,194;CIPOS=-194,194;CT=3to3;END=41626544;IMPRECISE;MAPQ=37;PE=13;SF=0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25;SVLEN=293142;SVMETHOD=EMBL.DELLY;SVTYPE=INV	GT:DV:GL:GQ:RC:DR:FT	0/1:0:0.0,-1.80618,-36.0:18:22559:6:PASS
chr19	41428057	DUP_uwash_chr19_41428057_41485308	T	<CN0>,<CN2>	.	.	AC=7,1;AF=0.00139776,0.00019968;AFR_AF=0.003,0;AMR_AF=0.0014,0;AN=5008;CS=DUP_uwash;EAS_AF=0,0.001;END=41485308;EUR_AF=0,0;NS=2504;SAS_AF=0.002,0;SITEPOST=0.994;SVTYPE=CNV	GT	0|0
chr19	41429041	YL_CN_PJL_4443	T	<CN0>	100	.	AC=5;AF=0.0009984;AFR_AF=0.003;AMR_AF=0;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=41486643;EUR_AF=0;NS=2504;SAS_AF=0.001;SVTYPE=DEL	GT	0|0
chr19	41442269	chr19_41442269_41524247	A	<CN0>,<CN2>	.	.	END=41524247;SVTYPE=CNV;LPROBS=992.38	GT:CN:GL:PL:CNL	0/1:2:-0.30,-68.00,-1000.00,-31.24,-0.30,-1000.00:3,680,1000,312,3,1000:-1000.00,-68.00,0.00,-31.24,-1000.00
chr19	41446744	CNV_19_41446744_41493035	A	<CN0>,<CN2>	.	.	END=41493035;SVTYPE=CNV	GT:CN:CNL:CNP:CNQ:GP:GQ:PL	0/1:2:-1000.00,-24.37,-0.00,-6.02,-19.63:-1000.00,-26.84,-0.00,-9.39,-93.71:93.9:-0.00,-35.91,-1000.00,-13.70,-14.03,-102.81:94:3,242,9998,58,0,195
chr19	41449094	YL_CN_ACB_4545	A	<CN0>	100	.	AC=7;AF=0.00139776;AFR_AF=0.0045;AMR_AF=0.0014;AN=5008;CIEND=-500,1000;CIPOS=-1000,500;CS=DEL_union;EAS_AF=0;END=41517150;EUR_AF=0;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	0|0
chr19	41450458	LINE1_2876	T	<INS:ME:LINE1>	.	.	TSD=null;ASSESS=20;INTERNAL=NR_001278,INTRONIC;SVTYPE=LINE1;SVLEN=3664;MEINFO=LINE1,2355,6019,-	GT:GL	0/1:-0,-7.22,-144
chr19	42442594	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGGTGGTGGGGTCCTTGGTCTTTTGGGTTGGGGGGGGGGGGGCTGGGGGTCTGGGTTCCTGGGTTTGGGGGGGGGGGGGCTGGGGCCTGGGCTCATGAGGTTGGGGGGGGGGGCTGCTGGGGGCCTGGACTCCTGGGTCTGAGGGAGGAGGGCCTGGGGCCTGGACTCCTGGGGCCGAGGGGGGGGGGGCTGGG	GT	./.
chr19	43115024	N	N	<TRA>	20	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGATCTGATCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTCCCGGACGGGGCGGCTGGCTGGGCAGGGGGCTGATCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCGGGCAGAGGCTGCATTCTCGGCACTTTGGGAGGCCAAGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG	GT	./.
chr19	45105428	N	N	<TRA>	5.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GACTAGCTTGAAAAGGTGGTGTCTGATTTACATAGGGCACGAAAGATTAGTCAGACCAGGTGTGCCATTTGCATAGCACATGAAGAAGCTGGCCACCCACCCTAATATTTTATTATGCAGATGGGTTCTTTACCTGGCTGGCGCCATGTTGCCTGCTTTTTACTGTACGCGTGGTGACAAAGAGAAGGGGAGATG	GT	./.
chr19	50644327	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CACCGCGATCCACACTCTTCCCCCACACGACGCTCTTCCGCTCTGCCCGGCAGCCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGA	GT	./.
chr19	58254173	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAAAAAAAAAAAAAAAAAAACACAACCAAATTAGCCGGGCGTGGTGGCACATGCCTATAATTCCATCTACTCGGGAGGCTGAGGAGAATGGCATGAACCCGGGAGGCTGAGCTTGCAGTGAGCGAAGATCACGCCACTTCCTCCAGCCTGGGTCACAGAGCGAGATTCCGTCTCAAA;SVTYPE=DEL;CHR2=1	GT	./.
chr2	321682	.	T	<DEL>	.	PASS	SVTYPE=DEL;END=321887;SVLEN=-205;CIPOS=-56,20;CIEND=-10,62	GT:GQ	0/1:12
chr2	5181912	N	N	<TRA>	4.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCTTCCCCCCCCCCATCCCCTCCCCTTCCCTTCCCCCCCCCCTTCCCTTCCCCTTCCCCTTCCCCCCCCTGTTCCCTCCCCCTTCCCTTCCCCCCTCCTTTCCCTTCCCCTTCTCTTTCTCCCTCCTATACCTTCCCCTTCTCTTTCTCCCTCCTATACCTTCCCCCTCCTCTTCTCCCCTCTTTTCCCTTCCC	GT	./.
chr2	14477084	.	C	<DEL:ME:ALU>	.	PASS	SVTYPE=DEL;END=14477381;SVLEN=-297;CIPOS=-22,18;CIEND=-12,32	GT:GQ	0/1:12
chr2	15207583	.	N	<DEL>	44	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGGGAGGAGGGGAGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGAGGGGAGGGGAGGGGGGGGGGGGGGGGGGGAGGGGAGAGGAGGGGAGAGGAGAAGAGAAGAAAAGAAAGAGAGTAAGAAAGGAATCCTACCACGTGCCACAACATGGATGAGCCTGAAGGACAT	GT	./.
chr2	87625319	.	N	<INV>	27	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCAGCCAGGCGAGCCACCCAAGCCCCCCCTCCAGCCCACGCCGCCCACCCAGCCCGCCACCCAAGCCCGGCCCGCCAGCCAAGCAAGCCAGGCAGCCAAGCCAGCCAACCCAGCCAGCCAGCCAAGCCAGCCATGCCAGCCAAGCCATCCAGTCAGCGAAGCCAGCTGGCTAGCCAAGCCAGCCAAGCCACACG	GT	./.
chr2	87647647	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCAGCTAGCCAAGGCGGCCAACCAGCCAGCCAGTCAAGCTGACCAGCCTGCCAGCCAACCAACCCGGCCAGACAGCCAAGGCAGCCAAGCCGGCCAGGCAGCCAAGCCAGCCAAGCCACTGACCCAGCCAAGCCACCCAGCCAGCCAAGCCTGCCAAGAGACCCACCAACCCAAGCCAGCCAAGCCACCCAGCC	GT	./.
chr2	87724873	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGGCCTGCCAGCCAACCAAGCCGGCCAGACAGCCAAGGCAGCCAAGCCGGCCAGGCAGCCAAGCCAGCCAAGCCACCGACCCAGCCAAGCCACCCAGCCCGCCCAGCCAGCCACGCCAGCCAGCCCAGCCAGCCAGCCAAGCCAGCCCGCCAAACCAGCGAAGCCACCCAGCCAGCCAAGCCACCCAAGATCCCC	GT	./.
chr2	87725047	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGGCGGGCTGGGCTGGCCGGCTGGGGCGGCCGGCGGGCTGGCCTGGCTGGCCGGCTGGGTTGGCTGTCCGGGCTGGCTGGCTGGGCTGGCTGGCTTGGCTGGCCGGGTGACTTTGCTGGCTTGAATGGCTGAGTGGATTGGCTAGCTTGGCTGGCCAGCTGGCTTGGCTGTCTTGGCTGGCTGGGTTGCCTGGAT	GT	./.
chr2	87727650	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGCCGCCCAGCCAGGCAGACAAACAAGGCCGCGAAGGCAGGCCGCCCGCGAAGCCAGCCAAGCCAGGCAAGCCAGCCAGCCAGCCAAGACAGCCAAGCCAGCCAAGCCAGCCAAGACAGCAAGCCAGCCAAGCCAGCCAAGCCAGCCAAGCCACCCAGCCAGCCAAGCTGGCCAAGCCACTCAGCCAGCCAAGC	GT	./.
chr2	88859483	N	N	<TRA>	22.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCATGCGGTAGCTCCTGGCTATAGTTAGGGTTTTTTGTTTTGTTTCGCTTTTATGGCTGAATACTATTCCAGTGTATGGCTATATTACATTTTGTTTATTCATTCATTGGTTGGTGGCCATTTGGGTTATTTCCTCCTTTGGGCTATTATGAATAATGCCGCTATGAACATTCATGTACAGATTTTGTGCAGACA	GT	./.
chr2	88859625	N	N	<TRA>	25.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGGGCTATTATGAATAATGCCGCTATGAACATTCATGTACAGATTTTGTGCAGACATGTTTCCATCTCTCTTGGATATATCTAGGAGTAGAATTACTGGGTCATATGGTAACTCTATGTTCAACTGTTTAAGGAACTGCCAGATTGTTTTTCAAAGCCGCCGCACCATTTCACATTCCCACCAGAAACGTATGAG	GT	./.
chr2	89841329	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GATGATGATTCCATTCAATTGCATTCGATGATGATTCCATTCGATTCCATTCGATGATGATTCCATTCGGTTTCATTCGATGATTCTATTCAATTCCTTTCTATGATTATTCATTTCTTTTCCATTTGATGTTTCCATTTGTTTCCTTTTGATGATGATTCCATTCCATTCCATTCAATGGTGATTCCACTCATT	GT	./.
chr2	89854806	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGTGGAGTGGATTGGAGTGGAATGGAATGGAGTGGAATGGAATGGAATGGAAGGGAATGATTTTGAGAGGAATGGAGTGGAATGGAATCGAATGGAACAGAATGGAATGATTTTGAGAGGAATGGAGTGGAAAGGATTGGAATTGAGTGGAGTGGCATGGAATGGAGTCGAATAGAATGGAATGGAATGGAATG	GT	./.
chr2	90288349	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAGCAGAAGACGGCATACGAGATCTGATCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTTGAACCTGCACTGGCCTGACCTTGGCTCTGGCCCTGCTCTGCCTTGTTCCTGGCCCTGACCCAGACCCAGACCCTTTCCTGGCTCTGCAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG	GT	./.
chr2	90374017	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATTCCATTTGCTGATGATTCCATTCGACTCCATTCAATGATTCCATTCGATGATGATTCCGTTCGATTCCATTCGATGAGGATTCCATTCGATTAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAAAAAATGACCTGCAAGTCGAAGCGCTCGGGATTAAGCGTTG	GT	./.
chr2	90393031	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCATTCGTTTTCTTTCTATGATGATTCCATTCGAGTCCATTTGATGATTCTGTTCAATTCCATTCGATGATGATTCCTCTCAAATCCATTTGATGATTCCATTCGAGTACATTCGATTATTCCATTTGATTTTATTCGATGATGATTCCATTCGATTCCATTCGATGATGATTCCATTCGTTTTCATTCGATGAC	GT	./.
chr2	91595167	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCTATTTCATTCCATGATTATTCCATTCGTTTTCATTCGATTATTCTATTCAATTCCTTTCTATGATTATTCAATTCTTTTCCATTTGATGATTCCATGTGATTCCATTTGATGATGATTCCATTCGTTTGCATTCGATGATGATTCCATTCGGTTTCATTCGATGATTCTATTCAATTCCTTTCTATGATTATT	GT	./.
chr2	91977417	N	N	<TRA>	1	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCTGGACTCTTATAACAAAATAACATAAACTGGGTGACTAAAAAACAACAGATATTTCTTTTTTCATACTTCTTGAGGCTGTAAGATCTCAGGTCAAGATGCTCGCAAATTCAGTGTTGATGAGAGCCCATTTCATGGTTCATAGATGGTGCCTTCTCACACTCGGCTAATTTTTTGTATTTAGTAGAGACGGGG	GT	./.
chr2	91980792	.	N	<INV>	6	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTTTCTCTCCATTAAGCATGCCATTAACTGAGTAAAAGAATCAAGCTGCAATTATGTAAACTACGTTTTCTAAAACCATAAAGAAAAGAAGAAATAAAAAGGTATTTGGGAAAAAAATCCAAAGGTACAGTCAACTACACAAAAAAAGCTTAGTCTCATTAATCATTATGAAAATGCAAATGGTAACTGAAAGA	GT	./.
chr2	91995259	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCTTTTCAGAACGAATGACGTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCAAGACTACACGGGCTCACACTCCCAAGAACAAAAGTAAATCATCGCAAAGGTGCTTCCTGATAATTTTAGAGAATGGAGAATTACTGTAACATCTTTCTGATTTTAGGAGAGGTAGCAGTTCCCTGTTTAGCCTAAAC	GT	./.
chr2	92278132	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAACCCTCTTTTTGTAATATTTGGAAGTGGACATTTGCAGCGCTTTGAGGCCTATGATGTTTTAATGATTCGGCGACCACCGAGATCTACCCTCTTTCCCTACACGACGCTCTTCCGATCTTGTGTATTCAACTAACAGAGATGAACCTTTCTTTTTACAGAGCAGTTGTGAAACCCTCTTTTTGTGGAATCTGA	GT	./.
chr2	92313236	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTTGAGTCAACTCACGGAGTTGAAACTTGGTTTTGATACAGCAGTTTTGAAACCCTCTTTTTGTTAGAATCTTCAAGTGGATATTTGGATAGCTTTGAGGCTTTCATTGGAAACGGGAATATCTACACATAAGAACTAGACAGAAGCATTCTCAGAAACTTATTTGTGATGTGCGCCCTCAACTAACAGTGTTGA	GT	./.
chr2	98129524	N	N	<TRA>	5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TAAGTATATATTAAAGAATAGCATTGTTTACATAAGGCCTTTGAACTAAAATAAAATATTTCAAGATTTATTATAAATAATTGTAGCTATAAATGCCATGATTCTTTTTTTTATTTTTTATTTTTATTTTTTTTTTGATACAGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATATCGGCTCACT	GT	./.
chr2	110347664	N	N	<TRA>	30.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAATCCACACAGTATTCAAGCTTTTTTAGTAACCATGTTTCTTTTAAAAATCTGAAATTAGTGCTAGTGAGTTCTTATTGAGACAATATGAAGCCCTTTGCACTGTAAATATTTTATATTTTTGGAGAGACATTTGATGATATCTAAGAGTAAAAATGAATATATATGTGTGTGTATATATATACACACACATAT	GT	./.
chr2	114152908	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CACCGCGATCCACACTCTTCCCCCACACGACGCTCTTCCGCTCTGCCCGGCAGCCGCCCCGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGA	GT	./.
chr2	114822093	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATTGTGCCACTGCACTTCAGCCGGGGTGACAGAGCAAGATTCCATCCTCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAAGAAAGAAAAAAAAAAAAAAGAAAGAAAAAAAGAAGAGAAAAAGAAAAAGAGGAAAAAAGAAAGAA	GT	./.
chr2	116246477	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAATGCTAGATGTTAAGCACAGCCTAATGAGTGCTAGTTATAATTTT;SVTYPE=TRA;CHR2=11;END=58171838;SVLEN=0	GT	./.
chr2	122339851	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGAGAACGAGAGAAAGACAGAGAGAGCGGGAGAGAGAGAGAGAGAGAAAGAGAAAGGGAGGGAGAGAGACAGAGAGAGACAGACAGATAGACAGGCAGAGAAAGAGAGTAAGACAGAAGATAGGCACAGAGAGAGAGACAGAGAGACACAGAAAGAGAAAGAAAGAGAGAGGCAGACAGACAGAGAAAGACAGA	GT	./.
chr2	122339853	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTCCCTGTCTGTTTCTCTCTCTCTCTTTCTGTCTGTTTCTGTCTCTCTCTGTCTGTCTCTGTCTTTCTCTGGTTGTCTCTTTCTCTGTCTTTCTGTCTCTCTCTCTCTTTTTCTGTGTCTCTCTGTCGGTCTCTCTCTCTCTGTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCTCTCCCTCTCTTCTGTCTTCCT	GT	./.
chr2	122339890	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTCCCTGTCTGTTTCTCTCTCTCTCTTTCTGTCTGTTTCTGTCTCTCTCTGTCTGTCTCTGTCTTTCTCTGGTTGTCTCTTTCTCTGTCTTTCTGTCTCTCTCTCTCTTTTTCTGTGTCTCTCTGTCGGTCTCTCTCTCTCTGTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCTCTCCCTCTCTTCTGTCTTCCT	GT	./.
chr2	122339916	.	N	<DEL>	30	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAGAAAGAAACAAACAGAGAGAGAGAGAGAGAAAGAGAAAGGGAGGGAGAGAAAGAAACAGAAAGGGAGGGAGAGAGAGAGAGAGAGACAGACGGGGAGAGAAAGAGAGTAAGACAGAAGACAGACACAGTGAGACAGGCAGAGAGGGAGAGAGAGAGACAAAGACAGAGACAGAGACAGAGAGAAAGAAAGAGA	GT	./.
chr2	128127051	N	N	<TRA>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CATGGACACTCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAAAATACAAAAACAAAAACAAAATTAGCCGGGCATAGTGGCGGGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGTAGGCAGAGCTTGCAGTGAGCCAAGATCGCGCCACTGCACTCCAGCCTGGG	GT	./.
chr2	134821993	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCTTCCGATCTCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCACCACCCCGTCTGGGAGGTGTACCCAACAGCTCATTGAGAACGGGCCATGATGATAATGGCGGTTTTGTGGAATAGAAAAGGGGGAAAGAGATCGGAAGA;SVTYPE=TRA;CHR2=19;END=50644221;	GT	./.
chr2	135364636	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGTGCAGACGTGTGCCCTTCCGATCAAGAGGACGGCCCCCGAGAACTGTGGTGGGGAAAAGGACAGCCGCCGAGAACTGTGCTGGTGAAAAGGACAGACCCCGAGAATTGTGCTGGTGAAAAGGACAGACCCCGAGAACTGTGCTGGTGAAAAGGAGAAGAGCCGCGAACAGGGGTGGTGGAGAGGACGGGAGG	GT	./.
chr2	135364672	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGTGCAGACGTGTGCCCTTCCGATCAAGAGGACGGCCCCCGAGAACTGTGGTGGGGAAAAGGACAGCCGCCGAGAACTGTGCTGGTGAAAAGGACAGACCCCGAGAATTGTGCTGGTGAAAAGGACAGACCCCGAGAACTGTGCTGGTGAAAAGGAGAAGAGCCGCGAACAGGGGTGGTGGAGAGGACGGGAGG	GT	./.
chr2	141014019	N	N	<TRA>	24	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTTTCTTTTTTTTTTTTTTTTGTTTCTTGTTTTTTTTTTTTTCTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	GT	./.
chr2	161504861	N	N	<TRA>	5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGCATGTGGAGTGTCTGGAGCGGCTGCTGCCATCACACCAGCTGCAGCAGGAAGGTGCCGGCAGTGGTGGCAGGAGTGGCTGCAGGAGCAGCAATGGCGGTGATGAGATCCCCGTGCCCCACGGCCCCGAGGCAGCCGACTGCACCACCCCCACCCTCACACAGCCGGGCAGGACCCACTCCCAGGCCCAGGGCC	GT	./.
chr2	180884405	N	N	<TRA>	11	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATTATGAAAATATCACAAGGTGTACACCCACTGTGATATTAGAAGTAATAACTACCTAGGATATTATGAATATCACAGTGGGTGTACACACATGGTGTGTGTATACACACATGGTATATGCCCACTGTGATATTAAGAGGTATAGCTTCCTAAACTATTATGAATAATATGACAAAGTGTACGCGATGTATGTAC	GT	./.
chr2	203516734	N	N	<TRA>	33.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCGCTCTTCCGATCTTGCCTGTAGTCCCAGCTACTCTGGAGGCTGAGGTGGACAAATGGTTTGAGCCCAGGAGGCAGAGGTTGTAGTGAGCCGAGATCGTACCATTGCACTCCAGCCTGGGCAACAAAAGTGAAACTCTGTCTAAAGAAAAAGATCGGAAGAGCAC;SVTYPE=TRA;CHR2=14;END=21044	GT	./.
chr2	208493237	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGGCGGGTGGATTACAAGGTCAGAAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATGTCTACTAAAAATACTAAAAATTAGCCGGGCATGGTGGTGGACACCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATGGCGTGAACCCAGGAGGCAGAGCTTGCAGTGAGCTGAGATTGCACCAC	GT	./.
chr2	219112340	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATTATGATAGCTTACAGTTTGGAATTAATAAGCTTGTTCACACTGCACCCAATGCCACTGGAATGTCTCCTTTGTGAAATGTAATTTAATTCACCTCAGTGGTAAAGGTGAACCTGTTTATTGGTGATGAATCTGTTGATTTACCAAATTTCATTAAATCTAAACTATACACTTTTTTCTTTTTTCTTTCTCTCT	GT	./.
chr20	7543461	N	N	<TRA>	47.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GATCGCGCCACTGCATTCCAGCCTGGGCAACCGAGGGAGACTCTGTCTCAAGAAGAAAAAAAAAAGAAATTTTTGCATCTATGCTTATGATACATATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTTGTATAAGAAAATAAAATTGGGAGTTGAAGGGCGCTGTATTTCTATGT	GT	./.
chr20	13160730	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTGTAGTCTATGGACACAGCGTTGGCCATTCTGTATTCAGAATAAACAGCCTGCCCTTCTCTGAAGTCATCACTCATCCAGACTGTAGGTTGGCCTCCCCACCTCATTCTGAATCCTGATTCTAGGGGTCTCTAGTCAAAATTTGCATTTACAAAGCAACATAAAAAGTAAATTTCTTGGAAATTAAAGAGAAA	GT	./.
chr20	14962958	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGGGTATCTGGTGGAAGAAATTTCTAAGCAGCAAAACATTCAAGAGGTGACTTGGGTACTCTTAAATGCATTCAGTTTCAGAAGGGAAATGGAACATAAAATTTGGAAAATTTGCAGCCTAACAGTGCCAACGATGGGGAATGAAAAATCAGTCTCTTGCTATCCTTTCCCGTGGTGAGCTTTCAGCTGCCACAC	GT	./.
chr20	14988825	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGAAAAGAACTGGCTTTCTTTCTATGAAAATAAGTTGGTGAATTAACGTGCTATTAGTTCTTTATTAAAATAAAACTTTTGATATGTAGCCTATTTTACTGACCAATTATAAGATTATTTAAAATAAGAATACCTGTATGTTTTTAGAACAGAGAAAGTGGGAACAATGGAGAATGAAGTCACATATATTTTTTA	GT	./.
chr20	15000624	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TATTGTGTAGGTACTGATATAGAAAGAGAGAAAGCAAATTTTTACGAACATTTTATTGATGAAATTAAACATAATAATAATTGAATACTTAAAATATTAACTAGTAAATAAGAAGAAAATTTATTCTAGTAATGAAAAGGATGAAATGCTTAAAAATGGCTACAGTGATAAATTACATTATGTATATTTTACCAC	GT	./.
chr20	30964319	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AACCTCTGCCTCCCGGGTTGAAGTGATCCTCCTGCCTCAGCCTCTTGAGTAGCTGGGATTATATGCGTGAGCCACCACACCCGACTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTTACCATGTTGGCCAGGCTGGTCTTGAACTCCTTACCTCAGGTGATATAATATACAACAGATATAATATGTCTATTAT	GT	./.
chr20	33289750	N	N	<TRA>	51	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTTCCGATCTGCTAGTTTTTTAAGAGACGGGGTTTCACCATGTTGGCCAGACTGGTCTTGAATTCCTGGCCTCAAGGGATCCGCCAACCTCGGCCTCCCAAAGTGTTGGGATTATGGCTGTGAGCCACCACACCTGGCTGACATACTTCTCAGATCGGAAG;SVTYPE=TRA;CHR2=1;END=200077033;S	GT	./.
chr20	36552531	N	N	<TRA>	3	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCTGTCTCTGCAAATAATAATAAACAGCCAAGTGTGTTAATACACATTTGTGGTCCCATCTGCTCAGGAGGCTGAGGCAGGAGAATTGCCTGAGCCTGAGTGGTCAAGGCTAGAGTGAGCTGTGATTATGCATTGCATTCCAGCCCAGGGGACACAGTGAGACCCTGTTTAAAGAAAAAAACAAACAAAAACTAA	GT	./.
chr20	37274467	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCGGGAGGAGGAGGGGAAGATGCAGGAGGAGGAAGAGAAGATGCAGGAGCAGGAGGAGAAGATGTGGGAGCAGGAAGCTCCACTCTCAGGGTCCCCTACTCCAAGGTCCACTTTAGGGGCTGAATGCCCCCTCCTCATTCCACCAAACCAGTGCTTCCGTCCCGTGTCCAAACAAATGCATATTTCCAAGCCCTG	GT	./.
chr20	39841385	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTAGATGAAAATTACATTACATTTTTATATCATCATGGGTAATACTGACAACCTTTTTTTTTTCCTTTGGAGATGGAGTTTTAGTGAGTCACTCAGGCTGAAGGGCAGTGGTGTGAGCTGTGCTCACTGCAAGCTCTGCTTCCCATGTTCAAGCAATTCTCCAGTCTCAGCCACCAGAGTAGCTGGGATTACAGT	GT	./.
chr20	50072530	N	N	<TRA>	30	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCAGCCATCTCACCCATTCACCCATCCACTCATCCATTCACCTATCCACCCACCCATCCACTCATCCATCCACCCATCCATTCATCCATTTACCCACCCATTTACCTACCCATCCATTCACCCACGCTTCTACCTACCTGCCCTTCCATCCACCTACCCAACCACCCATCCATATACCCACCCACCCACCCATG	GT	./.
chr20	51231055	N	N	<TRA>	30	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCTTCATATTTCATGTCTAAAATTTTAGTGAATAGAAATATTCATGAGACTCTGAACTCCAGTCATAATAATAACTGGTTGTTATGCAACATTACTTGTTCAAGGTTCCCTTCCCTTCCTTTCCCTTCCCTCCCCTCCCCTCCCCTCCCCTTCTCTCCCCCCCCCCCCCCCCCCGCCCCCCCCCTCCCCCCCCTC	GT	./.
chr20	57930541	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCCCCCTCTCTCCCTCTCCCCCTCCCCCCCTCCCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCCCCCTCCCTCCCCCTCTCTCTCTCCCCCTCTCCCCCTCTCCCCCTCTCCCTCTCTCCCTCTCCCTCCCTCTCTCCCTCTCCCTCTCTCCCCCCCGCCCCCGCCCTCCCTCCCCTCCCCCCCCGCCCC	GT	./.
chr20	58889879	N	N	<TRA>	18	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCTCCCCTCCACCCATCCCTCCACCCACCCTCCCCTCCATCCTCCCTCCCCTCCGTCCACCCATCCATCCATCCATCCCCCCCCCCTCCCATCCACCCTCCCTCCCATCCATCCATCCTCCCATTCATCTATCCATCCATCCCTCGATCCTCCCATCCATCCATCCTCCCATCCATCCATCCATCCTCCCATC	GT	./.
chr20	62123945	N	N	<TRA>	37.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTAGGGCGAACGGCTGGATGGATGGAGGGATGGATGGATGGGTGGATGGGAGGAAGGATGGATGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGAGAGATGGATGGATGGATGGATGGACAGAAGGATGGATGGGTGGGGAGATGGATGGATGGATGGATGGATGGATGGATGGATAGAGAGAA	GT	./.
chr21	9551189	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AATTGAATTTCAAGAATAAACATTTTCATTTCACCACATCTCATTTCCACTTAATTTCAATTACATCATAACATTTCATAATTTCCCTTCATGATTTCACTTCATATAAGCTCATTTATCGGATCATCAATTTTCATCTCATTTCATCTCATCGCATTTCATCATTACATCTCATTTCTTCTCATTTTATGTCAT	GT	./.
chr21	9551316	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AATTGAATTTCAAGAATAAACATTTTCATTTCACCACATCTCATTTCCACTTAATTTCAATTACATCATAACATTTCATAATTTCCCTTCATGATTTCACTTCATATAAGCTCATTTATCGGATCATCAATTTTCATCTCATTTCATCTCATCGCATTTCATCATTACATCTCATTTCTTCTCATTTTATGTCAT	GT	./.
chr21	10775770	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGAATGGCACCGTTTTTTAATGATCCGGAGAAAACGGAGATGTACACTCTTTCCCTGCACGACGCGCATCCGAACGGAATGGAATGGATAGGAATGGAGTGGAACTGAAAAGAAAGAAAAGGAATCGAATTGAATGGAATGGAATGGACCCGCATAGAATGGAATGGCATCGAATGGAATGGAAGGGACTGTAGG	GT	./.
chr21	10790155	.	N	<DUP>	5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCCGATCTGGAGTGCAGTGGAGTGGAGTGGAGTGGAGTTCAGGGGAGTGGAGTGCAATTTAATGTAATGGAATGGAATGGAGTGCAGTGGAGTGGAGTGGAGTGGAATGGAATTGTTTGGAGGGGAGTGGAGTGGAGTGGAGGGGAATGGAGATCGGAG;SVTYPE=DUP;CHR2=21;END=10808048;SV	GT	./.
chr21	10798149	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGAGTGGAGTGGGATGGAGTGGAGTGGAGTGGGGTGGAGTGGAGTTGAATTGAACGGAATGGACTGGAAGGGAATGGAATGGAGTGGAATGGAATGGAATGGAATGGAATGGAATGGAGTGGAATGGACTCGAATGGAATGGAGTGGAATGTAGTGGAGTGGAGTGAAGTGGAATGGATTGGAGAGGAGTGGAGT	GT	./.
chr21	10801399	.	N	<DUP>	4.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AATGGAATGGACTGGAATGGAATGGATTCGAATGGAATCGAATGGAACAATATGGAATGGTACCGAATGGAATGGAATGTAATGGAACGGAATGGAATGGAATAGAATGGAATGGAACTGAATGGAATGGAATGGAATGGAATGGAATGGAATAGAATGGAATGATATCGAAAGGAATGGGCTCGAATGGAATGG	GT	./.
chr21	10820713	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACTGAAACGAAAGGGAGAGAATGGGATGGGAAGGGAAAGAAAGGAAAGGAAAGGAAAGAGAGGGAAAGGAAATAAAGGGAAGGGAAGGAATAGAGAAGAAAGGAAAAGAAAGGAAAGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGCAATGGAATGGAATCAACCGGAAGGGAATCGAA	GT	./.
chr21	20702434	N	N	<TRA>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTCTTTATATATATATTTATATATATTTCTTTATATATATATTTATATATATTTCTTTATATATATTTATATATATCAGTATATATTTCTTTATATATTTATATATCAGTATATATATTTCTTTATATATATTTCTTTATATATATTTCTTTATATATATATATCAGTATTTGTGTATG;SVTYPE=TRA;CHR	GT	./.
chr21	21960406	N	N	<TRA>	2	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTATATATATACCCTGGTCTGTGTATGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATACACACCCCGGAGTGGGTATATATATATACACCCGGGAGTGGGTATATATATATACACCCGGGAGTGGGTATATATAGATACACCCGGGAGTGGGAAGGTATATATACAGCCTGG	GT	./.
chr21	27039776	N	N	<TRA>	3	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TAAAATGGAACAACATACTATACTAAAAGTTATAGGAATGTGGTCTCTCAAAATATCTTATTCTACTGTATTCAACACATTCAAAATAATAAAATATTCAAGATATTCAAAATATCTTATTGTCTTTTCTGTCTGCAGTTGACTACAGGGAACTGAAACCACAGAAAGCAAAACTGTGGATAAGGGGGATTACTG	GT	./.
chr21	33264612	N	N	<TRA>	47	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GACAAAGCAAAATTACGACTAAAAAAAAAAAAAAAAAAAAAAACGGAACTCAATACAAAAAAATCAACTGAAAACAAAAGAAGGCAGTAATTTTAAAAACAGCAGGCAAGCCAGGTGCGGTGTCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCTGAGATCAGGAGTTCAAGACCA	GT	./.
chr21	45024792	N	N	<TRA>	3	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CACACACAATATACACACCAAACACTGTGCACACACCACACACCACACACAATACATACCACACACCACATACACACCATGCACTACACACTACACACACCACACACACAACATACACACCAAACACCATGCACACACCACACACACACCAAACACTATACACACCACATACACACCACATACAACATATACACC	GT	./.
chr22	20342140	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCGCCCGCGTCGACCGTCCTGCGCCTCGCGGACGTGGTCGCCGCCCACGGCGTCGCCGACGGGGTCGCCGTCCACGGCCTCGCCGACGGGGTTGCCGTCCAGGGCAGCGCTAACGGGGACGCCGTCCAGGGCATCGCTAACGAGGACGCCGCCCTGGGCATCGCCAACGACGACGCCGTCCAGGGCATCGCTAAT	GT	./.
chr22	24293599	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCTCACCCTGAGCTCCAGCGTTTGCTGGTCTGGCTGGCATACAGAGATGCAGCTGGAGCACAATTCAGTGGAGGAGGCAGGGCTATAACTAAGCAGTAGGGCAGAGAGCAGAGCCAGAGCCCCCTGGGCAGGCCAGAGGGAGGACCCTGCTCAGCTGACTCTTCCCAACTGCTGCCCTTGGTACAACCAGCTTG	GT	./.
chr22	29965541	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTAAAATGCAGAAGCTAGGCAAGAGGCCCTCAGGACTTCCGACACTGAAATTTACATCCTGGCTGGGCACAGTGGCTCACACCTGTAATCCCAACACTGGGAGGCTGAGGCAGGAGGATTGCTTGAGCCCAGTAGTTTGAGACCAGCCTGGGCAACGAGAGCAAAACTCCATCTCAAAAAAAAAGAAAGAGAGAA	GT	./.
chr22	29987742	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTGGGCAACATGGCAAAACTCTTATCTCTACAAAAATGCAAAAATTGCCGGGCGTGGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCAAGGCAGAAGGATCACCTGAGGCTGGGAGTTCGAGACCAGCCTGACCAACGTGGAAAAACCCCGTCTCTACTAAAAATACAAAATTAGCCAGGCATGGTGGT	GT	./.
chr22	33759249	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AATCATCTGACCCAGCATGGGGCTCCCGCTTTTCCCACAGGGGGCTGCTCAGGTTGACTCTCCTTTGGAGTAGCAGAGTGTGAGCTGAGGGAGACCAGGAGAGGCAGGGTCCCCCTGTCTACAGTAGTATCTGCACACATTCCAAAACCCAGAATGGTTGCCTGAAACCATGCAATAGTGCTGTATAAGTCCGTT	GT	./.
chr22	35566379	N	N	<TRA>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAGAGCCTTCAGATGAAAGTTGAGATCCTACAGGACCAAGTAGGCGGAGATAATATTTCCTTTTAAATTATAGAATATAAGCCTTCTGCCCTTTCTGAATAGAACACTGTAAAATTATATCTATATACGTATATATATATATACACATATATACGTATATATGTGTATATATACACATATATATGCGTATATATG	GT	./.
chr22	38065350	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTACTGTTTTAGAGATGGTCTCACTCTATTGCTGAGTCTAGACTGTAGTGGTGCAGTCACGGCTCATTGCAGCCTCTAACTGCTGGGTTCACGTGATCCTCCTGCCTCAGCCTCCTGAGTAGCTAGGAGCACAGGCATATGCCACCACACCCAGCTAATTTTTTAAAAAATTTTGGCCGGGCGCGGTGGCTCACG	GT	./.
chr22	42513850	UW_VH_10048	G	<CN0>	100	.	AC=5;AF=0.0009984;AFR_AF=0.003;AMR_AF=0.0014;AN=5008;CIEND=0,361;CIPOS=-316,0;CS=DEL_union;EAS_AF=0;END=42516668;EUR_AF=0;MC=BI_GS_DEL1_B3_P2888_15;NS=2504;SAS_AF=0;SVTYPE=DEL	GT	0|0
chr22	42523949	CNV_22_42523949_42533891	T	<CN0>,<CN2>,<CN3>,<CN4>	.	.	END=42533891;SVTYPE=CNV	GT:CN:CNL:CNP:CNQ:GP:GQ:PL	0/1:2:-219.27,-13.51,-0.03,-1.16,-5.94,-12.17,-19.13,-26.49,-34.12,-41.91:-222.00,-14.53,-0.01,-1.76,-7.18,-14.55,-22.41,-29.79,-37.25,-61.63:17.5:-0.00,-15.77,-224.97,-2.90,-2.75,-10.04,-11.68,-7.89,-20.27,-31.57,-20.20,-14.66,-29.26,-39.72,-48.44:18:3,1
chr22	42523951	.	T	<CN0>,<CN2>,<CN3>,<CN4>	.	PASS	END=42533891;SVTYPE=CNV	GT:CN:CNL:CNP:CNQ:GP:GQ:PL	0/2:3:-1000,-108.47,-8.95,-0,-13.68,-36.4,-63.65,-93.48,-124.93,-157.45:-1000,-108.9,-8.34,-0,-14.32,-38.19,-66.35,-96.19,-127.47,-176.57:83.4:-7.51,-108.64,-1000,-0,-9.26,-15.72,-18.98,-5.61,-43.76,-76.66,-45.38,-22.66,-74.42,-108.65,-142.55:56:91,1082,9
chr22	43601849	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGGTGTGTGGGGTGTGGGGGGTGTGGGGTGTGTGGGGGGTGTGGGGGGTGTGGGGGGTGTGGGGTGTGTGGTGTGTGTGGTGTGTGTGGTGTGTGTGGTGTGTGTGGAGTGTGTGGTGTGTGTGGAGTGTGGTGTGTGTGGTGTGTGTGGTGTGTGTGGAGTGTGTGGAGTGTGTGGTGTGTGTGGTGTGTGTG	GT	./.
chr22	43601896	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGGTGTGTGGGGTGTGGGGGGTGTGGGGTGTGTGGGGGGTGTGGGGGGTGTGGGGGGTGTGGGGTGTGTGGTGTGTGTGGTGTGTGTGGTGTGTGTGGTGTGTGTGGAGTGTGTGGTGTGTGTGGAGTGTGGTGTGTGTGGTGTGTGTGGTGTGTGTGGAGTGTGTGGAGTGTGTGGTGTGTGTGGTGTGTGTG	GT	./.
chr22	44936030	N	N	<TRA>	27.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCTCTTCCCCCACACCCAACACCCCATCCACCCCCCCCCCCACCCATCCACCCACCCACCCATCCACCTGCCCCCCCAACCACCCACCCCTCCACCCACCCCCCCCCCCACCCATCCATCCATCCACATATCTACCCATCCACCCACCCACCTCCCCACCCACCCACCCACCCACCCTCCCGTCCATCCACCCA	GT	./.
chr3	8907578	N	N	<TRA>	32	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTAATTAAAAGCTAACATTCAAGAAGTGTGTGTGTATGTGTGCGTGTGTGTATGTATGCATGTGTGTGTGTGTGCGCATGTGTGTGTGTGCGTGTATGTGTGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCT	GT	./.
chr3	9425916		C	<INS:ME:L1>		.	SVTYPE=INS;END=9425916;SVLEN=6027;CIPOS=-16,22	GT:GQ	1/1:15
chr3	12665100		A	<DUP>		.	SVTYPE=DUP;END=12686200;SVLEN=21100;CIPOS=-500,500;CIEND=-500,500	GT:GQ:CN:CNQ	./.:0:3:16.2
chr3	19776832	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGGGGGGGGGGGGGGGGGGGGGGGGAAGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGAAGGAGGGGGAGGGAGGGGGGAAGGAGGGTGGAGAGGGAGGGAGAAAGAGGGGGAGGGAGGGAGGAAGGAGGGAGGAGAGGGAGGGAGAAAGAGAGGGAGGGAGGGAGGAAGGAGGGAGGGGAGG	GT	./.
chr3	19776864	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGGGGGGGGGGGGGGGGGGGGGGGGAAGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGAAGGAGGGGGAGGGAGGGGGGAAGGAGGGTGGAGAGGGAGGGAGAAAGAGGGGGAGGGAGGGAGGAAGGAGGGAGGAGAGGGAGGGAGAAAGAGAGGGAGGGAGGGAGGAAGGAGGGAGGGGAGG	GT	./.
chr3	22097802	N	N	<TRA>	30	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTTAAAAATATTTTAAATATTTTAAAAATGTTTTAAAACTCTGAAAACTTTATAAAATATTAAGCATAATCACATTAATTGCTGACATACTTCCTAAT	GT	./.
chr3	24565105	4920	N	<INVDUP>	.	PASS	PRECISE;SVMETHOD=Snifflesv1.0.8;CHR2=3;END=24566175;STD_quant_start=3.171300;STD_quant_stop=4.430414;Kurtosis_quant_start=20.475509;Kurtosis_quant_stop=25.149940;SVTYPE=INVDUP;SUPTYPE=SR;SVLEN=1070;STRANDS=--;RE=71;AF=0.67619	GT:DR:DV	0/1:34:71
chr3	25400602	N	N	<TRA>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTCAGGATGATGCTGGTCTCATAAAATGAGTTAGAGAGGAGTCACTCTTTTTCTATTGTTGGGAATAGTTTCATAAGGAATGGTACCACTTCCTCTTTGTACCTCTGGTAGAATTTAGCTGTGAATCCATCTGGTTCTGTGAATCCATCAGGTGGGGTGGCCAGTCCGGGGCCCACGTCGGCCCAGCCGCCG;SV	GT	./.
chr3	25401059	N	N	<TRA>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAGAACTTCCAATACTATGTTGAATAGGAGTGGTGAGAGAGGACATTCTTGTCTTGTGCTGGTTTGCAAAGGGAATCCTTCCAGGTTTGCCCATTCAGTATGATATTGGCTGTGCGTTCTCATTAATAGCTCTTATTATTTTGAGATATGTTCCATCAATACCTAGTTTATTGAATGTTATTAGCATGAAGGGTT	GT	./.
chr3	26650960	N	N	<TRA>	30	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGTGTGTGAGATTTTTATTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGTGAGCTTTATCAGGCAATTTGGTACAATAAAGTTTAGCTTTTGGTTGAAAATATTGAATTATTATAGTCACTGTTGAGAATTATTTTGC	GT	./.
chr3	26663922	.	N	<INV>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACCTTTCCAGTAAAGGGGCTGTGAGTCTAACTGTATGTGTGGTTCCCTCCACCACACCCTAAATCAAAAGTTCCATCCCTGGAGTCTCTTTAATTCTAGAGACACTGAGATTTAGCTCATACAGAAGGAGAAAATGACCTTCAACTGGATAAGCTTTCCTTGAGTACCCATTAGATACAAAACACTGCTGGATGT	GT	./.
chr3	27007856	.	N	<DUP>	42.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TACTAAAAATACAAAAAAAAAAAAAAAAAAAAAAATTAGTCAGGCACGGTGGCTGACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGGGGATCTCCTGAGTTCAGGAGTGCAAGACCATCCCGGGCAACATGGTGAAACCCCGTCTCT;SVTYPE=DUP;CHR2=3;END=153162700;SVLEN=12	GT	./.
chr3	49283352	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CATAATTTACAAAAATTAATGCCTTTTTGTGGCCTAAAAATTAATCCCCAACTGTCTGCATAGAAGCACTGTACTGTCTGCTGGATTTCAACCTGGGCATCCCACACACAGGGCATATGCATCTGTTTAGAAACTTGTTCTGGGGCCGGGCACAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCTAAGG	GT	./.
chr3	49520642	N	N	<TRA>	12	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGAGGGTGGTGGCTGTTGAAAGGATCCCAGATTCTGCATTTCTTCTGGACTTGCATCATTTATCCAGCCCAGTAGCTATTTTTCTTTTTCTTTTTTTCTTTCTTTCTTCCTTTTTTTTTTTTTTGACAGAGTTTTAGTCTTGTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGCAACCTCTGCC	GT	./.
chr3	51212071	.	N	<DUP>	3	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTCAGGAGACATAGGAGGCATGACTGCTTTACTTCAGAAATTTGAGGTTACAGTGAGCTGTGATTGCACCACTGCAATCTGTCCCAGGAGATAGAGTAAGATCCTGTGTATAAAATGAAAAAATAAAGAAAAATAAAATGATTTTAAGTTAAAAAATAATTCATAGATCTCCACTTCTTTAGGGTCACTTGAATA	GT	./.
chr3	59125549	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAA	GT	./.
chr3	60132754	.	N	<DEL>	52.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGAGCTAGAGAGAATGGGGGTAGCTACGTTCAAACCATTTGGATGAGGCAGGACTCGCCTGAAATGGGGTAAGTGTAGCCCTCCTAAGAAAGAAGCACTGTGCGGATGAACATCATGAACACCATCCAAGTTTCAACATGTCTGAGATTAAATCTGCAGCAAAAGTTTACTCCATTTCTGGGTGTGTAAAGCAGC	GT	./.
chr3	60872125	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAAGGCGCCTATGCTAATAAGAAAGTGATCCAATATTCATGAGAAGAACTTGAAAAACTATTATTTTTGCCTGCAATCTTCTTGGCTTTTCCATAATTAATATGTCATTATCATCAGAAGGCTAAGAGATCAAGAGTGGTAAAAGCCACAAATCAAGACTCAATATCATTTCGTTGACTTGAGAGTGATGGAGAA	GT	./.
chr3	63661065	N	N	<TRA>	30	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTTGTGGTCCTAGCTACTCAGGAGACTGAGGCAGGAGGATCACTAGAGCCCAGTGAGCTATAATTGTGCCGCTGCATTCCAGCCTGGGTGACAGAGCGAGACTCCATCTCAAAAAGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACGAT;SVTYPE	GT	./.
chr3	68176842	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCATCCCACCACCACCACCATCGTCATCACTATCATCATCACCCCACCACCATCATCACACCACTACCATCATCACACCACCACCACCGTCACACCACCACCACCATCATCATCACTACCACCATCATCATCACACCACCACCACCATCGTCATCACTATCATCATCACACCACCACCATCATCACACCACTA	GT	./.
chr3	72768390	N	N	<TRA>	2	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACTTTCCTTCTACTCAATTTCATTACACGCCACTCCCTCCCCCTCCATTTCCTTTCTTTCCCTTCCCTTCCCTTCCCTTACCTTCCATTCCATTCCATTCCATTCGATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATGCCATTCCACTCGGGTTTATTCCATTCCTTTCCATTCCATTC	GT	./.
chr3	74801651	N	N	<TRA>	19.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCCACCAAGTGCTCAGGGGTTCCCGAGACACAGTGGGGAGTGAGGTTGAGGCCGTGGTGGAGGCCCTGGGCCTGGGAGTGGGTCCTGCCCGGCTGTGTGAGGGTGGGGGGGGTGCAGTCGGCTGCCTCGGGGACGTGGGGCACGGGGATCTCATCACCGCCATTGCTGCTCCTGCAGCCACTCCTGCCACCACT	GT	./.
chr3	74801697	N	N	<TRA>	19.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCCACCAAGTGCTCAGGGGTTCCCGAGACACAGTGGGGAGTGAGGTTGAGGCCGTGGTGGAGGCCCTGGGCCTGGGAGTGGGTCCTGCCCGGCTGTGTGAGGGTGGGGGGGGTGCAGTCGGCTGCCTCGGGGACGTGGGGCACGGGGATCTCATCACCGCCATTGCTGCTCCTGCAGCCACTCCTGCCACCACT	GT	./.
chr3	77338430	.	N	<DEL>	31	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGCGGGTAAACGGGTAAGCTGAGGCTAGATCACCGAAGAAATAAAGTAAAATTGACGGCTTAATGGGTAAGCTGAGGCTAGATCACCCCAGACATAACGTAAAATTGACGGTTAAACGGGTAAGCTGAGACTAGATCACCCCAGACATAAAGTAAAATTGACGTTTAAACGGGGACACTGAGGCTAGATCACCCC	GT	./.
chr3	90321422	.	N	<DEL>	5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATACGAGATCTGATCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTGAATGCATACATCGCAAAGAAGTTTCTCAGAATGTTTCTGTCTAGCCCCCAAAGCACTCCAAATATCCATTTGCATATTCTACAAAAAGACTGCTTCCAAACAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG	GT	./.
chr3	90332250	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCAAGCAATACCGAGCAGTTTCTCAGAATTTTTCTGTCTATTTTTTATTTGAAGTTATTTCATTTTCCACTACAGGCCGTAATGCACTCCTAATATCCACTTGCAGATTCTACAAAAAGACTGTTTGCAAACTGCTCAAACAAAAGAAAAGTTCAACTCTGTGAGTTGAATGAGCACATCACAAAGAAGTTTCTC	GT	./.
chr3	90332253	.	N	<DUP>	19	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AACCAGAGCCCCAAACGCCCCAAAAATACCCGTTACAGATTCTACTAAAAGACTGTTTCCAAACTCCTCAATGAAAAGAAAGTTTCAACTCTGTGAGATGAATGCACACATCACAAAGAAGTTTCTCGGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCCTATTTCACCATAGTCCTCAAAGGGCTCAGA	GT	./.
chr3	90332390	.	N	<DUP>	19	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AACCAGAGCCCCAAACGCCCCAAAAATACCCGTTACAGATTCTACTAAAAGACTGTTTCCAAACTCCTCAATGAAAAGAAAGTTTCAACTCTGTGAGATGAATGCACACATCACAAAGAAGTTTCTCGGAATGCTTCTGTCTAGTTTTTATGTGAAGATATTTCCTATTTCACCATAGTCCTCAAAGGGCTCAGA	GT	./.
chr3	90353974	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCACTCCTAATATCCACTTGCAGATTCTACAGAAAGACTGTTTGCAAACTGCTCAAACAAAAGAAAAGTTCAACTCTGTGAGTTGAATGAGCACATCACAAAGAAGTTTCTCAGAATGCTTCTGTCTAGTTTTTATGTGAATATATTTCCTTTTCCACTATAGGCCGTAATGCGCTCCAAATATCCACCTGGAGA	GT	./.
chr3	90453627	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGTCTACTTTTTAGGTGGGGGTATTCTTGTTTCCAACAAAGGCCTCAAAGTGGTCCCAATCTCCTATTGCAGATTCTACAAACAGAGTGTTTCACACCTGCTCTCTCAACGGCACGGTTCCCCTCTGTGTGTTGAATGCACACATCACAAACAAGTCTCTGAGAATACTTCTGTGTAGTTTTTCTTCGAAAATAT	GT	./.
chr3	95035898	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTTCTGTCTTAGTCTCTCTCTCTCTCTCTCCCTGTCTGTCTGTCTCTCTCTCTCTCTCCCCCTGTCTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTGTCTCTCTGTCACTCTCCCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTGTCTGTGCCTATCTTCTGTCTTACTCTCTTTCTCTGGCTGAC	GT	./.
chr3	95874517	.	N	<INV>	30	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCTGAAAGAAATGTGGAATTATGTGAAGAGACCAAATCTATGACTGATTGGTGTACCTGAAAGAGATGGGGAGAATCGAACCAACCTGGAAAACATATTTCAGGATATCATCCATGAGAACTTACCCAACCAAGCTAGAGAGGACAACATTCAACTTCAAGAAATGCGGCCGGGCGCGGTGGCTCACGCCTGTAA	GT	./.
chr3	107273555	N	N	<TRA>	32	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGTATGGTTACTTGCGGAGTTTAACTTATGCATTTTTTATTCTTTAATTTATTCTGTCTAGTTTCTGTAGCTCTTTGATTCGTGAGTACTTATTTTCTAGATTTCTAGAAAGATCATGCAATTGCACTCCAGCCTGGGCAACAGGGGCGAACCCCCGCCCCAAAACAACGACGACAACAACAACAACAACAGCAA	GT	./.
chr3	108294403	5809	N	<DUP/INS>	.	PASS	IMPRECISE;SVMETHOD=Snifflesv1.0.8;CHR2=3;END=108294403;STD_quant_start=148.377896;STD_quant_stop=127.591740;Kurtosis_quant_start=-2.045946;Kurtosis_quant_stop=-0.756231;SVTYPE=DUP/INS;SUPTYPE=AL,SR;SVLEN=328;STRANDS=+-;RE=23;AF=1	GT:DR:DV	1/1:0:23
chr3	128604825	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACTAAAAATACAAAAATTGGCCGGGCATGGTGGCGGGTGCCTGTAATCCCGGCTATTCAGGAGGCTGAAGCAGGCGAATTGCTTGAACCCAGGAGGCAGAGATTGTAGTGAGCCAACATTGCACCACTGCAACCTCTACCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTATCTGGGACTGCAGG	GT	./.
chr3	130081127	N	N	<TRA>	30.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCGGCCACTGGGGAGTCTGGGTCGGCAGAGACACGTGAAGCGAGGGTTGGCGGGCCGGAGGTGGGGTGGGACTGCTCACCTGCATTCCAGCCTGCTTGTCCGTGCGAGCTCTTGTCTCAAAAAAAAAAAAAAGAAAAAAAAAGTTATCCAGGAAAATCTGGACCCTCGCCTAATTCTTCTCCATATATATATAT	GT	./.
chr3	137861723	N	N	<TRA>	38	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACATTTCGCAAAAGAAGATATACAAACAGCCAAGAAACATATGAAGAAATGCTTGGCCGGGCGCAGTGGTTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTAGATCACCTGAGGTCAGGAGTTTGACACCAGCCTGGCCAACATGATGAAAC;SVTYPE=TRA;CHR2=X;END=40391849;S	GT	./.
chr3	149292637	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGGTAGCCAGGATGGTCTTGGTCTCGATATCCGGCCCCCTGATCTGCCCACTTCGTCTTCTCAGAGTGCTGGGATTAGAGGCGTGAGCCACCGCCCCCGGCCTGTTCTATAAATTTCTAAGTGATACACATAAAGTTTATTTTAAAAATTACATCA	GT	./.
chr3	152178421	.	N	<INV>	9	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGTGAGGCAGCCTGACACTTGCTGATCTTGTCTTTTAAGTGTGGAGTCCTCTATGGAGTGGGTTGGGTACTTACTAGCTGGCCTCTGCCAGCTGTTTGGCTGCCTCAGTTTCTGCCCTTCACAGACATGCTGGCCACCTGGTGTGACATTCAGTGGCCTTGTTTGCAGCTAGTATGATGAGACAAGTGGATCAGG	GT	./.
chr3	152896617	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGTCTCGGTGGCGGGTGCCTATAATCCCAGCTACCCACGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAAATGGTGCAGTGAGCCAAGATCGTGCCATTGCACTCTAGCCTGGGCAACAGAGTGAGACTTCATCTCAAAAACAAAACAAAACAAAAAACTTGGTTGGCCTAGTGGCTCAATCCCAGCA	GT	./.
chr3	178111037	N	N	<TRA>	39	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCTTGCAGGGACCCGAGATTGCGCCACTGAAGGCCGCAGCCAGGCCTGGGCGACAGAGCGAGACTCCGTCTAAAAAAAAAAAAAAAATAAAAAAATAAAAAAAAAAAAAAAAATGGGAAGAAGTAGATTTCGGCAGGCCAATGCTGCCCCTGAGAATAAAAAGAAAAAAAGCCACATAACATATGGTAATCATCT	GT	./.
chr3	180554119	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCCCCACTCTTCTTCTATATAGTACTGGAAGTCATAGCCAGAGCATTCAAGCAATAGAAAAAATAAAAGACATCTAAATACATTAAAAATGTCAAACTATCTTCACAGATGATATAATTCTATGCCTAGAAAACCCTAAAGACACCTCCATAGGCTCTGGAACTGATAAACACACTTCAGTCAAGTCTCAGAACA	GT	./.
chr3	195056986	N	N	<TRA>	57.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCCAGGCCGCTCTCGACCCCCGGACCCCAGGTGCTCCACCCGCCACAGCCTCCCAAGGTGCTGGGATTACAGGCATGAGCCACCACACCCGGCCTTCGTTAGTTTTAAAACCAAAAATAGGGCCCCCCCCCGCAAAAAAAAAAAAAAAATTTTTTATGACGCTTCAAGAACATAGTGAAACCCTGTCTCTACAAC	GT	./.
chr4	6257278	N	N	<TRA>	12.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GACAATAAAACAATCTTTTTTATTTTTATTTTTTAGTGACAGGGTCTCACTCCGTTACCCAGGCTGGAGTGCAGTGGTGCAATCATAGCTTACGGTAGCCTTGAACTCCTGGGCTCCAGTGATCCTCCCACCTCAGTCTCCTGAGTGGCTAAAACTACAGGTGC;SVTYPE=TRA;CHR2=1;END=88473124	GT	./.
chr4	9973697	N	N	<TRA>	8	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGAGTCTCTCTAAAAGAAAGAAAATACTCTTGTTTGGGAATAGAGCATTGAATAGAAATATGTGTGCCATAGTAAACCATGTGCATATGCAGGGAGGTAAAGACTCTGCTAGAACATTTGTATGTTGCTGTAAAGAAATGCCTGAGGCTGAGCTATTTATAAAGGAAAGAGGTTTAATTGGCTCATGGTTCTACA	GT	./.
chr4	12785174	N	N	<TRA>	35	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCATCGCGGGCTGAGGTAGTAAATACTCACACCCGTCCAACCAGCGCAAACAACCCCAACCCAACCTAAAAAAAAAAAAAAAAAAAAACCTAAAGATCCATAAAACAAGCTAATGTTTTTGTTTCTGTGTGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGACTTGGTTTTCCTTTTTTTGCCCCGGC	GT	./.
chr4	18665128		T	<DUP:TANDEM>		.	SVTYPE=DUP;END=18665204;SVLEN=76;CIPOS=-10,10;CIEND=-10,10	GT:GQ:CN:CNQ	./.:0:5:8.3
chr4	37231764	N	N	<TRA>	22	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGAAGGAGAATGGCGTGAACCCAGGTGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCAATCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAGGTTTAACTCTATAGGTTGAATCCACACATCACCAAGCAGTTTCACAGATAG	GT	./.
chr4	37231766	N	N	<TRA>	5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACTCGGGAGGCTGAGGAAGGAGAATGGCGTGAACCCAGGTGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCAATCCAGCCTGGGCGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAGGGTTAACTCTATAGGTTGAATCCACACATCACCAAGCAGTTTCACAGATAGCTTCTATCTAGTTTA	GT	./.
chr4	37510915	N	N	<TRA>	6	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGGGCAGAGGGTCTCCTCACTTCCCAGAAGGGGTGGCCAGGCAGAGGCGCCCCCCACCCCCCAGACAGGGCGGCTGACTGGGCGTGGGCTGCTCCCCACCTCCCTCCCTGCCGGGGTGGCTGGCCGGGCGGGGGCTGCCCCCCAACTCCCTCCCAGATGGGGCGGCTGGCCGGGAAGGGGCTGCCCCCCACCTAC	GT	./.
chr4	38656803	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAAACTAGCCGGGTGTGGTGGGACATGCCCATAATCCCAGCTATTCGGGAGGCTGAGGCAGGAGAATCACTTGAAGCTGGGAGGAGGAGGTTGCAGTGGCACAATCTCGGCTCACTGCAAAGTCGCCTCGCAGGTTCAAGCGATTCTTCTCCCTCAGCCTCCGGAGTAGCTGGGATTATAGACACGTGCCACCAC	GT	./.
chr4	43882577	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCATTCCATTCCAATCCATTCCATTAAATTCGGGTTCATTCCATTCCATTCCTTTCCATTCCGTTCAGTTCCATTCCATTCCATTCCATTCCTCTCGTGTTGATTCCACCCCATTCCATTCCATTGATTCCTTTCCATTCCATTCCATTCCATTCCATTCCATTCCACTCGGGTTCATTCCATTCCATTCCATTC	GT	./.
chr4	49251731	N	N	<TRA>	4	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATCACGGGGGTGTGGACAGCGCCTGCAATGGGGGGATCCAAACGTTTTTCCCCCCCCCGGATATGAGGAACAATATCACAAGGGGGTTGTACAACCCCTGTGATATTGGGAGTAACTTTATACCCTTTCCACATGGATATTAGGAACAATATCACAGGCGGAGTTTACACCCCCTGCTATTTTACCTGTAATATT	GT	./.
chr4	57914181	N	N	<TRA>	41	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGGCTAAATTTTGTATTTTTTTAGATATGGGGTCTTGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGAGCTCAGGCAACCTGCCTGCCTCGGCCTCTCAAAGTGCTGGGATTATAGGTGTGAGCCACCACGCCCGGCCTCCCCTTCGCCCCCCGCCCGCCCCC;SVTYPE=TRA;CHR2=3;END=49368469	GT	./.
chr4	63016359	.	N	<DUP>	3	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGAGAGAGAGAGAGAGAGAGACAGGGAGAGAGAGAGAGAAAGAGAGAAAGAGACAGAGAGAGAAAGACAGAGAGAGAGAAACAGACAGAAAGAGAGACACAGACAGAGACAGAGAAACAGCCGACAGGGGGGAGAGAGAGAGAGAGACAGACAGAGAGAGACAGACAGACAGACAGGCAGAGAAAGACAGTAAG	GT	./.
chr4	63016407	.	N	<DUP>	3	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGAGAGAGAGAGAGAGAGAGACAGGGAGAGAGAGAGAGAAAGAGAGAAAGAGACAGAGAGAGAAAGACAGAGAGAGAGAAACAGACAGAAAGAGAGACACAGACAGAGACAGAGAAACAGCCGACAGGGGGGAGAGAGAGAGAGAGACAGACAGAGAGAGACAGACAGACAGACAGGCAGAGAAAGACAGTAAG	GT	./.
chr4	64069041	N	N	<TRA>	11.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TACATATGATATATCTATACTATATATACTATATATAGTATATATAGTATATATAGCATATCTATACCACATATACTATATATAGTACATATGTAGTATATCTATACTATATATACTATATATAGTATATATGTAGTATATATAATACGTATATATAGTATATATGTAGTATATATACTACGTAT;SVTYPE=TR	GT	./.
chr4	66211961	2749955	A	<INS>	485	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=66211962;CIPOS=-19,6;CIEND=-19,6;SVLEN=81;RT=0,13,0;GAP=81;MAPQ=54,54;PID=2.135,2.847;PLENGTH=0.996,0.96;RLENGTH=10841	GT:DR:DV:GQ:HR:PL	0/1:36,36:13,13:436:0,0:485,0,436
chr4	66212029	2749957	T	<INS>	1234	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=66212030;CIPOS=-34,12;CIEND=-34,12;SVLEN=78;RT=0,27,0;GAP=78;MAPQ=55,55;PID=2.121,2.154;PLENGTH=0.998,0.996;RLENGTH=7279	GT:DR:DV:GQ:HR:PL	0/1:37,37:27,27:379:0,0:1234,0,379
chr4	83762621	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GATCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTACTCCAGCCTGGGTGACAGAATGAGACTCCATCTCAAAAAAGAAAAAAAAAATTTTATATATATATATATATATATATATATATATATATATATACACACACACTAAAAATACAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATC;SVTYP	GT	./.
chr4	83786512	N	N	<TRA>	2	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GATATATATTAGAAAATAAGAAGTGTGGGGGAAGATGTGAAGAAGTTGGAAATTCCCATTATTGGTGGGAATGCAAAATGGTGCAGCCACTGTGCAAAACAGTATGGCGTTTCCTCAAAAAAGTAAATAGAATCATCCTATGATCCAGCAATCCCACTTATGTGTATATATCCCAAGGAGTTTAAATTAGACTAT	GT	./.
chr4	100031730	N	N	<TRA>	59	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCTCCAGCTTTTAGCCGACTTTAGAGCAGAAGAAGTCTCTTTATTTGGTCTAAAATTTTCGAAGAATATCTCTGATGCCTTCCTTCTATGGAATAAATGGTTTTCTTTTCTTTTCTTTGTTCTTTTTTTTTTCTTTGTTTTTTTTTTTTTCTTATTTTTTTTTTTTTGCTTTGTTTGTTTTTTTTTTTGTTTGT	GT	./.
chr4	125391736	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGCTCAGTCCGTGGCTGGCGTACGAGCGCGCGTCCTGCCTCTCTTCCTGCCTTGTGTTCTTCCGTCCTTCCTTCCTTCCTTCCTTCCTTCCTACCTTCCTTCCTTCCTTCCTACCTTCCTTCCTTCCTTCCTTCCTACCTTCCTTCCTTCCTTCCTTCCTTCCTACCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	GT	./.
chr4	158907289	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAAGCTGGAGGCGTACGATCACTGCGAGGAGAGGTGGGGAGGGGGGCGGGTCGGGAGGGGCATAGCATTGGGAGGTATACCTAATGCTATATGACAAGTTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGCGCACATGTACCATAAAACTTAGATTATAATAAAAAA	GT	./.
chr4	178270194	N	N	<TRA>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCTCTATCCCTGTCCATCTGTTCCTCTCTGTTGTTGTCTCTTTCTCTTTTCGAGTGTTTCTATTTATAGCTGGGTGTGTGCCTGTTCCCAGGTCTCTGTCTCTAGCTCTGTGTTTTTTTTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGT	GT	./.
chr4	186748531	N	N	<TRA>	2	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCATTATCATCACTGTCACCAACAGCACCATCACCACCATCATCATCACCATTACCATCCTCATCATCACCATTACTATCATCACCATCATCACCACCATCACCATCATCACCATTATCATCACCATCATCATCACCATCACCATCATCATTACCATCATCACCATAATCATTACCATCACCACCACCACCAGCA	GT	./.
chr4	187033865	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTGACGGGTTGATGAATGTTGTCAAAGGCTTTTTCTGCATCTGTTGAGATAATCGTGTGGTTTTTGTCTTTGGTTTTGTTTAAATACTGGATTACATTTATTGATTTGCAACCCAAAAAATAGGAGAAAGTTTTTGCAATGTACGCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACT;SVTYPE=TR	GT	./.
chr4	187996331	2762323	C	<INS>	227	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=187996332;CIPOS=-13,1;CIEND=-13,1;SVLEN=62;RT=0,9,0;GAP=62;MAPQ=53,53;PID=4.063,8.751;PLENGTH=0.925,0.887;RLENGTH=5813	GT:DR:DV:GQ:HR:PL	0/1:43,43:9,9:227:0,0:227,0,555
chr4	187996369	2762324	A	<INS>	820	PASS	IMPRECISE;SVTYPE=INS;SVMETHOD=NanoSV_v1.2.0;END=187996370;CIPOS=-26,12;CIEND=-26,12;SVLEN=62;RT=0,20,0;GAP=62;MAPQ=52,52;PID=3.255,5.763;PLENGTH=0.987,0.994;RLENGTH=5634	GT:DR:DV:GQ:HR:PL	0/1:43,43:20,20:499:0,0:820,0,499
chr5	28787995	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCATTTTATGTTTCCAATTTCTCCCTTTTGGAACGTGAGTGCTATCTTATTTCTGTCTTATCACACTGTAAAGTTTTTTTTTTTTAAGTTTAGTCACACAAAGTATGTTACTGGAGTAAAACACAATCTCCTGAGTAGCTGGGATTACACGTGTGCACCACCACACCCAGCTAATTTTTGTATTTTTGTAAAGA	GT	./.
chr5	28787996	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTTTTTTTTAAGTTTAGTCACACAAAGTATGTTACTGGAGTAAAACACAATCTCCTGAGTAGCTGGGATTACACGTGTGCACCACCACACCCAGCTAATTTTTGTATTTTTGTAAAGATGGGATTTTGCCATGTTGCCCAGGCTGGTCTCCAACTCCTGACCTCAAAGTCATCCGCGTTCCTGGGCA;SVTYPE	GT	./.
chr5	31930312	N	N	<TRA>	35	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AACCCGGGGGGCAGAGCTGCCAGGGGGCAGCGATCGCCTCCCTGCACCCCAGCCGGGGCGACAGAGCGAGACTGTCTCCAAAAAAAAAAAAAAAAAAAGACTAAATGTACGACATATCTTTAAAAGGTAATAGCATATCAATTTGGTTAGATTTTTAAAACCAGTGCCACGTATGTTTATTTACTACTATGCCAC	GT	./.
chr5	31930368	N	N	<TRA>	35	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AACCCGGGGGGCAGAGCTGCCAGGGGGCAGCGATCGCCTCCCTGCACCCCAGCCGGGGCGACAGAGCGAGACTGTCTCCAAAAAAAAAAAAAAAAAAAGACTAAATGTACGACATATCTTTAAAAGGTAATAGCATATCAATTTGGTTAGATTTTTAAAACCAGTGCCACGTATGTTTATTTACTACTATGCCAC	GT	./.
chr5	43377818	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGGATACTACATTAGACTTAGTTGTCATCCTCATTAGTTTCCTCTTGGCTGTGACAATTTTCCCCACTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAG;SVTYPE=TRA;CHR2=10;END=9222751	GT	./.
chr5	45996244	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCGTTTGGTGTTTTAGACATTAAGTCCTTGCCCATGCCTATGTCCTGAATGGTATTGCCTAGGCTTTTTTCTGATTCTTATCTGAAGATATTTTCCTTTTCCCCACAGGCCACAATGCACTCCCAAATATCCCTTTGTGGATTCTACAAAAA	GT	./.
chr5	63979148	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAAGACAGAGACAGACAGAGAGAAACAGGCAGAAAGCGAAAGAGAGAGAGAAAAACAGGCAGGACAGGAGGGAGAGAGAGAGAAAGAGAGAGAAAGAAAGGACAGAAGGAGCGAGAGAGGGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCAATCCCACCACGAGGACCCGG	GT	./.
chr5	68317876	N	N	<TRA>	1	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCCATTGCATTCCATTCCATTCCTTTCTGTTCCATTCAATTCCATTCCATTCCATTCTATTCGTGTTAATTCCATTCCATTCTATTCCATTCCATTCCATTGAAATCGAGTTGATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCTTTCCATCCCATTCCAT	GT	./.
chr5	94594988	N	N	<TRA>	5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TACTAGTAATCAGTACCTGGGTCATCATGTCTGAGGTGGAGAGTGAATTCATCAACTGGGCAGCAACCACGGCAACAGAAGCCAACCGCAGTCAATGCTGGCTATGCATCAAATTGCCAGAGACCACAGGAAATGGACTGCCTTGCAGAGTTGTCCTTGCCAATATTTCTGAATGGCTCTGTCACTACAAATGGG	GT	./.
chr5	97651568	N	N	<TRA>	2	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCATTATCATCACTGTCACCAACAGCACCATCACCACCATCATCATCACCATTACCATCCTCATCATCACCATTACTATCATCACCATCATCACCACCATCACCATCATCACCATTATCATCACCATCATCATCACCATCACCATCATCATTACCATCATCACCATAATCATTACCATCACCACCACCACCAGCA	GT	./.
chr5	97651602	N	N	<TRA>	2	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCATTATCATCACTGTCACCAACAGCACCATCACCACCATCATCATCACCATTACCATCCTCATCATCACCATTACTATCATCACCATCATCACCACCATCACCATCATCACCATTATCATCACCATCATCATCACCATCACCATCATCATTACCATCATCACCATAATCATTACCATCACCACCACCACCAGCA	GT	./.
chr5	105522555	N	N	<TRA>	32	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AATCCCCCAGCAGTTCTTGTGAGAAACAGAGTCTCATTTCTATTAGATAAAGCCACCTTTTCTTTCTTTTCTAGGGGAGAATATTTGCTTTCTAAGTTTATCATGAGAAGAGGAAGAGGAGCCTTCTTTTTTTTTTTTTTTTTTTTTTAGATGGAATCTTTCTCTTTCACCCCGGCTGGAGTCCAGTGGCCTGGT	GT	./.
chr5	128211062	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAACCCCAGCAACGCGGAAGGCTAAGCCAGAACAATGGTGGGCACCCGGAAGGCAGAGCTTGCAGTAAGCCGAGACCGCGCCACTGCACTCAAGCCTGGGGCAACAGAGCAAGACTCCGTCTAAAAAAAAAAAAAAATCACAAATGTTTATAGAAGCAGTATTCACAATAGCCAAAATATAGAAACAACACAAAT	GT	./.
chr5	156202979	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTATTCAATAAAAAACTGAGTCACTCAATACCTAGTACTGGGAGACTTTGTGAAGACTTCCTCTGTCATAGACCTGATAAGGCACATGGATATGATTCTAAATATAAAGAGAAAGTACTAGAAAGTTGAATTCCTGTATTAGATCATTCTCATACTGCAATGATGGAGTACCTGAGACTGGGTAACTTATAAAG	GT	./.
chr5	160422522	N	N	<TRA>	51	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAGGATTCCCCGGTCCAGGAATCAAGGGTTGGAAGTGAAAGTGGCACCACCCACAATCACCCCTAATGATCCACTGGCAACATTTTTGCTTCCTGTTTCCAAGACATTATGTTCTGCTGGCCTAGAGGTCTTTTTTTTTTTTTTTTTGAGACCGGGGCCGCCTCTGTTGCCCAGGCTGGGGCGCCGGGGGGGGGT	GT	./.
chr5	162104002	N	N	<TRA>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCAGATGCCGTCAACATGTTTTTTTTACGGCCTGTAGACCGCGGGCCACTACACTCTCTCCTCTGACTACACTCCCCCGTCTTCGGGATTTCTCTATATCAATTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAACTACAGTATATATACAGTATATATATATATAGTATGTATATATACAATATATATATATA	GT	./.
chr5	169514230	N	N	<TRA>	30.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGGAGTTCAGACGTGTGCTCTTCCGATCTCACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTAAGAGTGATAAATGCCATTCACAAGTTTGGGGATTTGGAGTTAATATAATATCAAATAACCAATTTAGACATTGTGTAGACATAGATCGGAAGAGCGTCGTGTAGGGAAAGA;SVTYPE=TRA;CHR	GT	./.
chr5	169514261	N	N	<TRA>	30.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGGAGTTCAGACGTGTGCTCTTCCGATCTCACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTAAGAGTGATAAATGCCATTCACAAGTTTGGGGATTTGGAGTTAATATAATATCAAATAACCAATTTAGACATTGTGTAGACATAGATCGGAAGAGCGTCGTGTAGGGAAAGA;SVTYPE=TRA;CHR	GT	./.
chr5	178758588	N	N	<TRA>	30	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGGGGGAGGGAGAGGATGGGGAGAGTGAGGAGGGGAGGGGAGGGGAGGGAGAGGAGGGGAAGGGAGGGAGAGGAGGGGGAGAGAGGGGAAGGGAGGGAGAGGAGGGGGAGAGAGGGGAAGGGAGGGAGGGGAGGGGGAGGGAGGGAGAGGAGGGAGGGGAAAGGAAGAGAGGGGAAGGGAAGGGAAAGGAGGGG	GT	./.
chr6	20232263	N	N	<TRA>	25	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATGTTTAGGTACATGAATATACATGTATATACATGAGATATATATATATATATATATAAAATATATATATATATATTATATATATATATATATAATATATATATATATATATTTGAGATGGAGTCTCACTCTGTTTCCCAGGCTGGAGTGTAGT;SVTYPE=TRA;CHR2=X;END=42828498;SVLEN=0	GT	./.
chr6	20232336	N	N	<TRA>	25	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATGTTTAGGTACATGAATATACATGTATATACATGAGATATATATATATATATATATAAAATATATATATATATATTATATATATATATATATAATATATATATATATATATTTGAGATGGAGTCTCACTCTGTTTCCCAGGCTGGAGTGTAGT;SVTYPE=TRA;CHR2=X;END=42828498;SVLEN=0	GT	./.
chr6	27410686	.	N	<INV>	30	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGCCGTGGAGCTGGGACCACGCGGAACTCCCTCTCCTACATTTTTTTCAGCCCCACCGCGAGTTTGCATCCGCGGGACTTTTAAGAGGGAGTCACTGCTGCCGTCAGCCAGTAATGCTTCCTCCTTTTTTGCTTTTAGGTTTTGTCTTGCCTTTTTTTTTTTTCTTTCTTTTTTTCTTTCTTTTTGTTTTTTTCT	GT	./.
chr6	32555165	N	N	<TRA>	35.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGGAGGGTTGGAGGGAGGCGGGATGGCGCCAGTGCACTCCAGCCTGGGCAAGAAAGCGAGACTCCATCTTAAAAAAATAAATAAATAAATAAATAAAATAAATAAATAAATAAATAAATAAATAAAATAAAATTCAAATTTTTTACCGTGGACATCAGAGCCTATAATGATGAGGCTCCTGACTTTCTCTCTGT	GT	./.
chr6	33800609	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCGTCTGGGAGGTGAGGAGCGTCTCTACCCGGCCGCTCCGTCTGAGATGCAAGCAGACGCCGGCCTACGCGACCGGCCCGTGTCTGGAGTGCGGACGTGTGCCCCCCCGATCCCACCCCGTCTGGGAAGTGAGGAGCGTCTCCGCCCGGCAGCCACCCCGTCCAGGAGGGAGGTGGGGGGTCAGCCCCCGCCCGG	GT	./.
chr6	44012281	N	N	<TRA>	18.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCCACGCACATCCACACACACCGGTCCACGCACATCCACACACAGGTCCACACACATACACACACATACGTCCACACACATCCACACACACACCCACACACACACACACACACACACACCCACCCACACGCCCCCACACACACACACACACACCCACCCACACGCCCCCTCACACCCACACACACATTCATATAC	GT	./.
chr6	57267473	N	N	<TRA>	30	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGAATGGCGGGAACCCGGGAGGGGGAGGTTGCAGTGAGCAGAGATCCAGCCACTGCACTCAAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAGAATAGCAGAAGATCAAATTGTCAAAGTAAGTATTACCAAGCTTATGACTTTGAATTTTAGTGTGTGTGCTGGTGGTTTCCAAA	GT	./.
chr6	58777413	11159	N	<INVDUP>	.	PASS	IMPRECISE;SVMETHOD=Snifflesv1.0.8;CHR2=6;END=58778314;STD_quant_start=294.690176;STD_quant_stop=884.891632;Kurtosis_quant_start=-0.773421;Kurtosis_quant_stop=-1.349048;SVTYPE=INVDUP;SUPTYPE=SR;SVLEN=901;STRANDS=--;RE=11;AF=1	GT:DR:DV	1/1:0:11
chr6	58777422	N	N	<TRA>	32	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCAATTTTTGAACACTCTTTTTTTTAGAATCTTCAAATGGGTATTTGGACAGCTTTGAGGCTTTGATTGGAAACGGGAATATCTTCACATAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTATGAAGTTTGCATTCAACTCACAGAGTGGAACTTTCCTCTTTATAGAGCAGTGTTGAAACACTCTTTTTG	GT	./.
chr6	64384188	N	N	<TRA>	30.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAATCCACACAGTATTCAAGCTTTTTTAGTAACCATGTTTCTTTTAAAAATCTGAAATTAGTGCTAGTGAGTTCTTATTGAGACAATATGAAGCCCTTTGCACTGTAAATATTTTATATTTTTGGAGAGACATTTGATGATATCTAAGAGTAAAAATGAATATATATGTGTGTGTATATATATACACACACATAT	GT	./.
chr6	65298377	N	N	<TRA>	40	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACCCTCTAAAGACTAGAGATCAATTCAAAGGACTGGCTTTAGCCTCCAGCTACTGAACAGCTTTGGTTAATAAGAAGCACCTGCAGAAGACTAGAAGACAACAGGAAAGGGGTTGTCTAGTGTTTTTTTCTCTGTGTTGTCTTTTTTTTTTTTTTTTTTTTGAATTCCGTGTAAACAAAAACACGCAGTATTTAG	GT	./.
chr6	69947981	N	N	<TRA>	1	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGCCTATCTTCTGTCTTACTCTCTTTCTCTGCCTGTCTATCTGTCTGTCTCTCTCTGTCTCTCTCCCTGCCTTTCTGTTTCTCTCTCTCTCCCTCTCTCGCTCTCTCTGTCTTTCTCTCTTTCTCTCTGTTTCTCTGTCTCTCTCTGTCCGTCTCTGTCTTTTTCTGTCTGTCTGTCTCTCTCTTTCTTTCTGTC	GT	./.
chr6	76487192	N	N	<TRA>	3	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGCCAAGTGTGTTAATACACATTTGTGGTCCCATCTGCTCAGGAGGCTGAGGCAGGAGAATTGCCTGAGCCTGAGTGGTCAAGGCTAGAGTGAGCTGTGATTATGCATTGCATTCCAGCCCAGGTGACACAGTGAGACCCTGTTTAAAGAAAAAAACAAACA;SVTYPE=TRA;CHR2=12;END=70997975;	GT	./.
chr6	95008249	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAGAAAAAGGAAATAAAATAAGACAAAAAGAGAAAAAAAAGAAAAGGAAGGAAGGAAAGAAGGAAGCAAGAAGAAGGAAGGAAGGAAGGGGAAGAAAAGAAGAAGGAAGGGAGGGAGGAAAGAAAAGAAAGAGAAAAAAGAAAGAAAGAGAGAAAGAAAAGAAAGAAGGGAGGAAGGAAGAAAAAGAAAGAAAAG	GT	./.
chr6	96918879	N	N	<TRA>	8.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTAACACATACACATACACACATACTAACACATACACACACACTAACACATACACATACATATATACAAACATACACATACACACATACAAACACATACACACACACATACACATACACATACAGATATACTAACACATACACACACACACATACTAACACATACACATACACACATACTAACACATACACATAC	GT	./.
chr6	105398392	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCTAATAAAATAAATGAATGTTAGAATGTGTGGGAAAAGGCAAAGTAAAACAAAAAAAAATTTTAAGAAAGAGAAAAAGGATAAATAAGTGTTGCATTTTTAATTATTTGCAAAGCCACTAAATCTTTGGTGTTTTTTTTTTTTTTTTTCAATTTTTTGTTTAATTAATGTTTTAAAAGATCAAGATCGCTAGAG	GT	./.
chr6	107380286	N	N	<TRA>	57.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAAAGAGGATAAGGGGGAAGAGGGGTGGTTACAAGAGGTCGGGAGGGGAATGGAGGGGGGCGGGGTGGGGTGGGGGGAGATGGTTAATGGGTACAAAAAATTAGGGGCTGGGTGCAGTGGCTCATGCCTGTAATCCTAGCACTTTGGGAGGACGTGGCAGGAGCGTCGTGTAGGGAAAGAGTGTAGATCCCGGTG	GT	./.
chr6	134724037	N	N	<TRA>	23	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTTTGTTTGTTCCCTTCCTCCCTCCTTTCCTCCTTCCTTCCCTCCTTCCCCCCCTCCCTCCTTCCTTCCCTCTCTCTCCCCCTTTCCTTCCTTCCTTCCTCCGTCCCTCCCTCCCTCCTTTCCTTCCTTCCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTC	GT	./.
chr6	138774182	N	N	<TRA>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCTCCATGTTGGTAAGGCTGGTCTCAATATCCTGACCTCAGGTTATCCGCTCTCTTCGGCCTCCCGGGGTGCTGGGATCGCAGGCGTGAGCCACCGCGCTCAGGCCAATTTATTAATCAGACAGGAATAGGTCGGCCTGGTGTTTTACATACATCAGTTAGCTCAAGTTCACTGATGATGTTGGTCAAACTTTC	GT	./.
chr6	149575303	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CATTCAATTCCATTCCATTCCATTTGATTCCATTCCCTTCCATTGCATTCTACTCAGCTTTATTCCATTCCATTCCATTCCGTTTCGATCCATTACACTCAATTCCACTCTGGTTGATTCCATTGCATTCCATTCCATTCCATTCCATTCCATTCAATTCCTTTCCATTCCATTCCACTCGTGTTGATTCTATTG	GT	./.
chr6	167365347	N	N	<TRA>	20	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTATAATTGTAGAGCAAGGATTATTATAATATTGGAATGAAGAGTAATGCTACAAACTGATTATTCATAATATTTGTATACCATCATATCTATAATCTATTACTAGTATAACTATTCTTATTTTATATATTTTCTTTATTATACTGGAACAGCTCGTGCCCTCGGTCTCTTGCCTCAGGACTTGGGTGGCTTACC	GT	./.
chr6	170802311	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTGGGCGGAGGGGAGGAGGAAGAGAGGAGGAGGGGAGGGGGGGGAGGGGGGGAGAAGGGGAGGGGGAGGGGGAGGGGAGGGGGAAGGGGGGGAGAGGAGGGGGAAGGGGAGGAGAGGAGGAGGAGGAGAGGAGGAAGAGAGGAGGAGGAGAGGAAGAGGAGAGGAGGAGAAGAGGAGGAGGAAGGGGAGGAGAGG	GT	./.
chr7	1357039	N	N	<TRA>	3.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACATGGTGGTGTGCGCCTGTAATCCCAGCTACTCAAAAGGCTGAGACAGGAGAATTGCTTGAATCTGGGAGGTGGAGGTTGCATTGAGACAAGATCATGGCACTACACTCCAGCCTAGCCCACAGAGCAAGACACTGTCTTGAAAAAAAATAAAAACAAAAATAAAGAAAGCTAGCCAGTCATGGGGGTTCATGC	GT	./.
chr7	6012115	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTAACTGGAATGTTCTACAGTTCACATCCTGAGGAAACCAAATCACAGCATTAAATTATGGGAAATCAAACTCTTTTTGTTCCCCTGCAAGGTCACATCCTGAGGAAACCAAATCACAGCATCAAATTATGGGAAATCAAACTCTTTTTGTTCCCCTGCGAGGACAGCATTTTGCGACCTTGGCCGCACAGAGGA	GT	./.
chr7	6012181	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAGAATGCTGGCCGCGCAGGGGAACGAAAAGAGTTTGATTTCCCAGAATTTGATGCGGTGATTTGGGTTCCTCAGGATGTGACCTTGCAGGGGAACAAAAAGAGTTTGATTGCCCATAATTTGATGCTGTGATTTGGTTTCCTCAGGATGTGACCTTGCAGGGGAACAAAAAGAGTTTGATTTCCCATAATTTGA	GT	./.
chr7	8192253	N	N	<TRA>	32	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCACCACCACCACCCCCTCCCCCACCACTACCACCACCACCACCACCTCCTCCACCACCACCACCACCACCACCACCATCTCCTTCATCACCACTACCCCCACCACTACCACCATCACCTCCTCCACCATCACCACCACCACCACAACCACCATCTCCTTCATCACCACTACCCCCACCACCACCACCACCACC	GT	./.
chr7	20824948	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGCAGGTGCGAGGAGGCGCCGCTGCTGAAGGCCGAGTGACTCAGGCCCGAGTAATCCGAGTTGTAGCCTCCGAGCGGCGAGTGCAGCGAGGTTTGGAGCCCCCCGGCGGCAGGGTGCAGCGAGCCGGGCAGCGCAGCCGCGCTGTTCGGGTTCTGCACGTCGATCCAGCCGGCCCCCACGTCCCACCAGCTGGAG	GT	./.
chr7	21703767	N	N	<TRA>	41.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCATAATGGCTGCACTAACTTACATTCCCACCAACAGTGTACAAGGATTCCCTTTTTAAGCACTTCAATTTACATACCCAATTCATCAGTTTAATTTCAGTTATTATATCTCAATTTCCCAAAGTTTTTTTTTTTTTTTTTTTTGCTTTTTTTAAAAATTTATTGTCAACTGTTTTTTTTTTTTTGTTTTTATT	GT	./.
chr7	39070144	N	N	<TRA>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGTATAGAAATGCTAATCCTTTTTATATATTGATTTTATATCCTAAAATTTTGCTAAAGTTGTTTATCAACAGAAGAATAAACGGGCCAAGACTATGACTTTTTCTATATATATGTATATGTATGTGTGTGTATATACATATATATATATATATATATATATATATATATATATATATATATATATATATAGTAT	GT	./.
chr7	45292457	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGAGAAAGAGACAACCAGAAAGAAAAAGAGAGACACACAGAGAGAGAGAGCGAGAGAGACAGAGAGAGAGAAAGAGAAAGAGAGAGACAGAGATAGACAGAGAGACAGAGACAGAGAGAGAAACAGACAGACAGGGAGGGAGGGACGGAGACAGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGGC	GT	./.
chr7	55103982	N	N	<TRA>	59	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCTCCAGCTTTTAGCCGACTTTAGAGCAGAAGAAGTCTCTTTATTTGGTCTAAAATTTTCGAAGAATATCTCTGATGCCTTCCTTCTATGGAATAAATGGTTTTCTTTTCTTTTCTTTGTTCTTTTTTTTTTCTTTGTTTTTTTTTTTTTCTTATTTTTTTTTTTTTGCTTTGTTTGTTTTTTTTTTTGTTTGT	GT	./.
chr7	55955411	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGCGGCGGCGTCAGGGGGCGGAGCCTGCCGAAGCGCCCTTTGTCTGCGGAGGTGAGTGCGCGCCGGGAGGAGGCGGAGGCGGGAGGCGGCGGGCGGCGGGCGGCGGGCGGCGGGCGGCGGGCGGCGGCGGCGGCGGGAGGCGGCAGGTGGCGGGAGGGGCGGCCGCTGTCCCCGCTGTCCCCATTCCTGTCACCC	GT	./.
chr7	56087686	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TATGTAACACACCAATAGCATCCAGTAGAGTGTATATAAGGTACAACAAATAATTATTAGAAGAACCAATCAGCTGGGTGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACCTGAAGCCAGGAGTCTGAGACCAGCCTGGCCAACATGATGAAA;SVTYPE=TRA;CHR2=	GT	./.
chr7	56881746	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACGTGTGCTCTTCCGATCTAGACCTGGGCCTGTACAGGCCACCGGGAGGCAGGAGGTGGAACTGAGGAGCTTCGCTGGAGAAAGTTCAGGGTCTACAAAAGCCGGCGGGAGCTGGGCAGGCACTGAGTCCAAAGAGGTTGTTGGGAGGCAGAGATCGGAAGAGCGTCGTG;SVTYPE=INV;CHR2=7;END=63	GT	./.
chr7	57471578	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGGCTCACGCCTGCAATCCCAGCACTTTGAGAGGCTGAGACGGGCGGATCACTTGAGATCAGGAGTTCGAGACCAGACTGGCCAACATGGCGAAACCCCATCTGTACTAAAAATACAAAAATTAGCCCGGCAAGGTGGCGGGTGTCTGTAATTTCAACTACTGGGGAGGCTGGGGCAGAACAATTGCTTGAACCC	GT	./.
chr7	57546769	.	N	<DUP>	4	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAATGGAATTGAATCATCATGGAATGGAATCGAATGGAATCATCATCGAATTGACTTGAAAGGAATCCTCATTGAATGGAATTGATTGGAATCATCATTGAATGGAATCCTCTTCACATGGAATCAAATTGAATCATCATCAAATTGAATCAAAAGGAATCATCAACAAATGGAATTGAAAGGAATCATCATCGA	GT	./.
chr7	57685614	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCTGATCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTTGGTGTTACCTGTGCCTTGATTTCTACCTCAGCCTGCTGTACACCTGGGGCCTGGGTGTCCACCTGTGAGCCTGATGTACACCTGGAGTCCAGTGTCCCCTTGGTTACTAAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCG;SV	GT	./.
chr7	57949286	.	N	<DEL>	6.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGAGAAGTTTCTAAGATTGCTTCTGTCAAGATTTTATATGAAGATATTTCACTTTCACCTTAGGCCTCAAGGTGCTCGAAATGCCCCCTGGCCGATTCTACAAAAGGAGTATTTCAAACCTGGTACATCAAAAGAAAGTTTCAACTCTTTGAGATGAATGCACATATCACAAACAAGTTCCTCAGAAAGCTTCTG	GT	./.
chr7	57958883	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTCGTTTTCCAGGTTCTGCAAGTAGATATTTGGCGAGTTTTGAGGCCCATGGTGGAAAAGGAAATACCTACACATAAAAACTAGGCGGAAGCACTCTCAGAAATATCTTTGTGATGAGTGCATTCAACTCACAGAGTTGAACATTTATGTTGATAGAGGAGTTTTAAAACACTCTTTTTCAGGAATCTGAAAGTG	GT	./.
chr7	58037636	.	N	<DUP>	4	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACTTGCAGATTCAACAAAAAGAGTGTTTCCAAACGGCCCAAACAAAAGAAAGTTTCAACTCTGTGAGAGGAACGCACACATCACAAAGTGGTTTCTCAGAATTTGTCTTTCTAGATTTTATGAGAAGATAAATCCTTTTTCACCATAGGTCACAAAGCCTTCCAAATGTACAAATGCAGATTCGACAAAAAGAGA	GT	./.
chr7	61229546	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTGTGCCTTCAACTCACAGAGTTGAAGCTTCTTTTTGATAGAGCAGTTTTGAAACACTCCTTTTGTAGAATCTGCAGGCGGATATTTAAGTACTCTTTGAAGCATTCTTTGGAAACGAGAATACCTTCACCTAAAACCTAGACAGAAGCATTCTCAGAAACATCTTTATGATGTGTCCATTCATCTCACAGAGT	GT	./.
chr7	61978563	.	N	<DUP>	9	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGGCCTGTGGTACAAAAAGGAATGTCCTCACATAAAATCTAGACAGAAGCATTGTCGGAAACTGCTTTGTGATACCTACCTTCATCTCTCAGAGTTGAATATTCCTCTTGATGGAGCAGTTTTGAAAAACTCTTTTTGTTGAATCTCCAAGTGGATATTTGGACCTCTTTGTGGCCTTCGTTTGAGACGTGACTG	GT	./.
chr7	62665125	N	N	<TRA>	3	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATACACAACACACACTCACATACACACAACACACACACATACACACCACACACACACACATACACACAACACACACACACACACCACACACACACACACACACACCCCAACAACACACACACACACATACCCAACACACACACATACACACACCACCCACCCACACACACACACCCCACACAACTACCCACAACA	GT	./.
chr7	63211754	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAAAGCTCCGGCCCCTCCGCCGCTTCGGCAGGCGCAGCTCCCGTAAGCCAGCGGCCACCTCCGAGACCTACAGCCCATCCCTACCCGACGCCCTTCCCAGCTCAGCTCCGCCCTCCCGGCGGCCTCTCCAGGCCCAGAAGCTCCTCAAGTCGGCCTCTCCAGACCCACTTGCAGCCTCCCGGCGTCCTCTCCGGG	GT	./.
chr7	64751648	N	N	<TRA>	15	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTTTAGCTTTCTATGTTCTTCTTTAGCTGAATGAGCATCTTTAAGCTAGGTGTTTTAGCCAGGCACAATGATATGTGTGTCTAATTCCAGCTACTTTGAAAGCTAAGGCAAGGGGATTACTGTATTAATAAATTCTCATGCTGTTAATAAAGACATAACCAAGACTGGATAATTC;SVTYPE=TRA;CHR2=11;	GT	./.
chr7	65045619	N	N	<TRA>	2	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAAAAAAAGAAAATAGCCTTATTCTATACATAATAAACTCAAGATGTGTTACAAATTTATATGTGAAATCCAAAATACTATAATATTTAAGGAATAGCTCAGTAGAATAACACTAAAATTTATTTTTTTTTTTTTTTTTTTTAAATTTATTTTTTTATTGATGATTCTTGGGTGTTTTTCTGTGGGGG;SVTYPE	GT	./.
chr7	65564139	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTGGGCGGAGGGGAGGAGGAAGAGAGGAGGAGGGGAGGGGGGGGAGGGGGGGAGAAGGGGAGGGGGAGGGGGAGGGGAGGGGGAAGGGGGGGAGAGGAGGGGGAAGGGGAGGAGAGGAGGAGGAGGAGAGGAGGAAGAGAGGAGGAGGAGAGGAAGAGGAGAGGAGGAGAAGAGGAGGAGGAAGGGGAGGAGAGG	GT	./.
chr7	66028234	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAAACACTGTAATTTAAATGATATTTTAAGTGTTTATACTGACCTGCAAAGTTTGTTTGCTTGTTTTGAGATGAAGTCCCAATCTGTTGCCCAGGCTGGAGTGCAGTGGCACAATCTTGGCCCACTGAAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGAATA;SVTYP	GT	./.
chr7	69490764	N	N	<TRA>	39.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGGGCGGAGGGGTGGGGGGCAAATCCGGGCCAAGCACAATTCCCCACCCGGGGCTCACGCCCCTCCCCCCCCTCGCCCCCCGGGGCCGCTGGGCCAACAGGCCCCCCCCCCCCTCCCCCGCAACTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAGGATGCTGAAGGAGCTGAGGCAGTGCTGAAGGATGTTAAA	GT	./.
chr7	77981839	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGAATAAATGGAAAAATGGCATCTATTTTACTTGGAGCATTTTTTAAAAACAGAATAATTGAATCCTGCCTCTTGAAAGATTTCTTCCCAATTCTAACACTTAAGTGATAATTTTCCTTCTATAAACGTCCATTCATTATTTCAGGTTTCTCCTGAAAAAAAAATCACACTTGCTTTTATGTCAAAACTAAAGAA	GT	./.
chr7	78190207	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAGAGAGGTGAGAGTTACAGATTGGTTTTGAGGAGTATTCTGGAGGTGATAATTGAAGCCATGAAAGTGGATAGAGTTTCCAAGGGAGAATGAATAAAATAGCATGGAAAAATGTCAGATCTGATGTGGCAAAACGTAATCATTGGAACACTTAAATTATCATCTTCTAAGATAATTTATGATGTAAACGTTAAT	GT	./.
chr7	80867125	N	N	<TRA>	2.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTTCCTTCCTTCCTCCCTTCCTTCCTTCCTTCCCTCCTGCCTTCCCTCCCTCCTTCCCTCCTTCCTTCCTCCCCTCCTGCCCTGCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTACCTTCCTTCCTTCCTTCCTACCTTCCTTCCTTCCTTCCTTCCTACCTTCCTTCCTTCCTTCCTCCCTC	GT	./.
chr7	85844668	.	N	<DUP>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATGGCACAGTTCAAGACATATCAGTAAATGTCCCATGTTTAATTCAGAAGCATTTGTATTCTCTGGGTGTTGGAAATAGTCTTCTATAAATGTTATCAGATATAATGATCAATAGTGACAATCAGGTGTTCCATATTCTTTAATAAGGTTTTGTCTAGTTGGTCTGACAGTGCTTTAAAGATTCCAACTATACTT	GT	./.
chr7	87441926	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGTCTCGGTGGCGGGTGCCTATAATCCCAGCTACCCACGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAAATGGTGCAGTGAGCCAAGATCGTGCCATTGCACTCTAGCCTGGGCAACAGAGTGAGACTTCATCTCAAAAACAAAACAAAACAAAAAACTTGGTTGGCCTAGTGGCTCAATCCCAGCA	GT	./.
chr7	94641432	N	N	<TRA>	8	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGAGTCTCTCTAAAAGAAAGAAAATACTCTTGTTTGGGAATAGAGCATTGAATAGAAATATGTGTGCCATAGTAAACCATGTGCATATGCAGGGAGGTAAAGACTCTGCTAGAACATTTGTATGTTGCTGTAAAGAAATGCCTGAGGCTGAGCTATTTATAAAGGAAAGAGGTTTAATTGGCTCATGGTTCTACA	GT	./.
chr7	99038316	N	N	<TRA>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCATCATGTTTCCCAGGGTTGGTCTTGAACTCCTGGGCTCAAGTGATCCTTTTACCTCGGCCTTCGGAAGTACTGGGATTATAGGCATGAGCCACTGCACCTGGCATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTCTTCCAGATTCTCAGGACCCTTTTTCGCTGAAATGTGGACCCGCGGACT	GT	./.
chr7	99273303	.	N	<INV>	30	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCATGCTTTGGGTGGAGCCTACACACCTTTTCCTCTCCTCTCCTCTCTCCTCTCCTTTTCTCTCCTCTCCTCTCCTCTCCTCCCCACTCCTCTCCCCTCCCCCTCCCCTCTCCCCTCCCCCTTCCCCTCCCCTCCTCTCCTCTCCCCCTCCCCTCCCCTCTCCTCTCCCCTCCCCTCC;SVTYPE=INV;CHR2=	GT	./.
chr7	100388995	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=;SVTYPE=TRA;CHR2=X;END=81316121;SVLEN=0	GT	./.
chr7	100616823	N	N	<TRA>	34	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGCCCCAGCCCCTGCTATGGGCCACGGTGTGAAAATGTGAGTGCTCACCATGCACTAAATCAGCCAGCACCTTGGTCTTGAACTTTGCAGCCTTCAGAGCTGTGAAAAATAAATCTCTATTTTTTTTTTTTTTAGACGGAAGTCTTGCTTTGTTGCCCAGGCTTGCCTCAAACTCCTGGGCTTAAGCTATCCTCC	GT	./.
chr7	104485067	.	N	<DUP>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTTTAAAAACATGTTTAAAATGGTACTTCCAGACCAATGATGAGAATGTGTCCTGAAACAGGTATTATTACTGATTTAATTCTGTGCTCCTGAAGTTTATTTTAAAAATAGCATATTGTAAAGGAGATAATCCTAGATTGTGTGGGTATAGTGTGTGCATTTCTATATGTACATAGCAGTCATAAAGTAATATTC	GT	./.
chr7	105311729	N	N	<TRA>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGCCCGCGCCTGTAATGCCCGCTGTACAGGTGGCTGACGCACCAGGATCACTTGAACCCAGGAGCCTGAGGTAGCAGTGAGCTGAGATCGCACCACTGCACTCAAGCCTGGGTGACAGAGCGAAACCCTGTCTAAAAAAAAAAAAAAAATTTATTTAAAAAGTGATTCAGAATTATTTCCTTGAGGTATAATTCC	GT	./.
chr7	111239299	N	N	<TRA>	44	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGCTACATTGTGATGTTTGGTAGGTTAGATATAATAATGCATTTTTGCCTTACAATATTTTCAACTGTTGAAGATTTATTGGGACATATCCCACATTGTATGAACATCTGTATTCCTGCATCCTCCATATATTCCTTTTTTTTTTTTTTTTTTTTGGGAAGGAGTCTCGCCCTGTTCCCCAGGCTGGGGTTCACT	GT	./.
chr7	112337515	N	N	<TRA>	2.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTGATGTGGGGAGCGCCTCTGCCCTGCCGCCCCGTCTGGGAAGGAGGTGGGGGAGGTCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGGAGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACGCTCGGATCG	GT	./.
chr7	112880349	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCTCCCCTCCTCTCTCTCCCCCTCTCTCCCTCCCTCTCTCTCTCTCTGTGCCTGTCTCCTCTCTTACTGTCTTTCTCTTCCTGTCTGTCTGTCTGTCTCTCTCTGTCTGTCTCTCTCTCTCTCTCCCCCCTGTCGGCTGTTTCTCTGTCTCTGTCTGTGTCTCTCTCTCTCTCTGTCTCTCTCTGTCTGTCTTTC	GT	./.
chr7	112916365	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCTTTCTTTCTTTCTTTTTTTTCTTTCTTTCTTTCCTTTTTTCTTTCTTTCTTGTTTTCTTCTTTCTTTTTCTTTTTCTCTCTTTCTTTCTTTCCTTTCTTCCACCCTTCCTTTCTTCTTCCCTTCTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT	GT	./.
chr7	114269923	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCAACAAAACAATAACAACAACAACAAAAACAACAACAACAACGACAACCACCAGCAGCAGCAGCAACAACAACAAAAGCAACAACAGCAGCAATAGCAGCAACAACAACAAGAGGAGCAACAAAAGTAGCTGCAACAATAACAAAAGCAACAACAGCAGCAATAGCAGCAACAACAACAAGAGGAGCAACAAAA	GT	./.
chr7	116070523	N	N	<TRA>	30.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCCCCTTCCCGCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTGTTTCTCTCTCTCTCTCTCTCTTTTTGTTCCTGTCTCTCTCTCTCTCTCTTTCTCTCTCTCCCTCTCTGTCTGTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTGTTCCTGTCACACTGGCCTCCTTTCTTTTT	GT	./.
chr7	125103018	N	N	<TRA>	33	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTCTTGCTTGCTTTCTTGCTTGCTTGCTTGCTTTCGTGCTTTCTTGCTTTCCTGTTTTCTTTCTTTCTTTCTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTCCTTTCTTTCTTCTTTTTTTCTTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTGCTTTCTTTCTTTTTTTTCTTTTTTTCTTT	GT	./.
chr7	125746123	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCAAAAATTGAACATATGCTAACCACAATTCAAATATCAATAAACTTTTAAAAATTGAAATCATATCAATTATCTTCTCAGACCACAGTTAAATAAAACTGGAAATCAATACCAAGAAGAACTCTCTCACAACTGTTATATGCATATGTGTAAATTAAACAATCTGATTATGAATGCTCTTTAGATAAAAAATG	GT	./.
chr7	126098488	.	N	<INV>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAATTTTCAGCTGTACCTTGTCTCCTGACATTTCTCCATTTCCTTAAAGGAGGGCAGTAAAAATGATTATCAGTATCCACATTGTATGTTTGTAATCGTTAATCACTGCATATAACTATCTTAGGCTACCTGTTGGTAAACTATATGCAAAGAATATATATACACACATACAATTAATCCATTATCACAATGTAT	GT	./.
chr7	126167431	.	N	<INV>	30	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AACAATACAAAATTAGCTGGGCATAGTGGTGCACATCTGTAATACTAGCTACTTGAGAGGCTGAGGCAAGAGAATCGCTTGAACCTGGGAGGCAGATGTTGCAGTGAGCCAAGATGGCGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTTCATCTCAAAAAGAAAAGAAAAGAAAATGGTATATGCTTCT	GT	./.
chr7	131272555	N	N	<TRA>	24	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCCCGCCCCCGCCCCCCACCCCCCCCCCCGCCCCCCCCCCCCCCCCTCCACCCGCTCCGCCCACCCCGCCCACCCCCCACACCCCACACGCCCCACACCCGCCCCACACTCCACACACTCCACACACTCCACACACACCACACACTCCACACACACCACACACTCCACGCTCCGCACACCCCACACCCACCCC	GT	./.
chr7	131272597	N	N	<TRA>	24	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCCCGCCCCCGCCCCCCACCCCCCCCCCCGCCCCCCCCCCCCCCCCTCCACCCGCTCCGCCCACCCCGCCCACCCCCCACACCCCACACGCCCCACACCCGCCCCACACTCCACACACTCCACACACTCCACACACACCACACACTCCACACACACCACACACTCCACGCTCCGCACACCCCACACCCACCCC	GT	./.
chr7	134897470	N	N	<TRA>	35	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGAGGAACAAGGGAGAAACTCTGTCGAAAAAAAAAAAAAAAAAAATTAGCCGGGCGTGGTGGTGCTGCCTGTGGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTGGAGCCCAGGAGGTCGAGGCTGCAGTGAGCTGTGATTGCACCACTGCACTCCAGCCTGGGTGACAGAGCAGGACACCGTCTCAG	GT	./.
chr7	142028760	.	N	<INV>	22	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCATAGCCTTGGCCTTCATGGGGTTTAAAGTACTTGGAAGATTCCAACTGTGCTAAATTCTACTGATTAACAGACACATGATACCATGAGAGATTATGAGAGGGAAACTGACCTCAGCTGGGAGCCAAGGGAAGCATAATGGTGATTATCACTAGGGCTGATGATGCTGAGATCTGAAGCACAGGTAGGTGTTGA	GT	./.
chr7	142588297	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACACACACACACCTGCAGACACACACACACCTGCACACACACACCTGCAGACACACACACACCTACAGACACACACACACCTGCAGACACACACATGCACACACACACCTGCAGACACACACACCTACAGACACACACACCTACACACACACCTGCAGACACACACACACCTGCACACACACACACCCACACACA	GT	./.
chr7	143936532	.	N	<INV>	1.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTCTATTTCTGTTCTTAACCCCAGCAGGATGCACAATTAACAAACACCGACAGCCACAGAGCACACCTCTGAGACAACATCTTTCATTATAGTCCCGGAATGCTTGGATTTCATGAATCCCAGCACTGCCCTTGTTCCCCAAGCTTCAGATGGTTCAAGTGAACCTGTCAGGAAGCAGAACCAGTGTGACAATG	GT	./.
chr7	143936535	.	N	<DUP>	1.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CATTCCCAAATGTTATACTTACTTACTAATTATTTTCTATCTTTTTAATTTTTATACCCTCAAATGTGTGTTTATAACCAATGTTCCTAAGGTGTTGGTTATATAGAAATGAATTCTCTAAAGCCATTATTCACAGAACTTTCAGCTGAGGAATTTTATATTAAGCAATTATGCAATTTACAAACTAATGAGTTT	GT	./.
chr7	143938341	.	N	<INV>	3	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTACATGATCTTCCAGCATTGGGCATTTGATTTCATTGAACATTTATAACTTCTATGCTTAAAGTACTTTTAGAATTTGACCACAGAGTTCATTTGAGAGTAATACAGACAAAAGCTAACATAAGATGGGTGGGTTTAGCCACCTTACAGAGTAAATTATCCTAAGAGATGTTTTATAAAAGAGCAGCTAATAAT	GT	./.
chr7	143959226	.	N	<DEL>	7	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGTGGCTGAGTTTACTGATGGTGCTGGGAACTCTGCTGCCCATCTGAGAAATGCCAAGGAAGGATCTTGCTTCTTCAAGTGCTTTTGAGAAGGGAAGGTGTTATTAAGTCATCACCTCCACAGAGTACCTTCCAATTATCATGAGAGCTTTGTGTGACGCATGAGAAAATAGGCTTCACTTGCACCAGCATGATT	GT	./.
chr7	146035843	N	N	<TRA>	30	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGAAAGTATAAAACTCATTGGTAAGAGTAAGTACATAGCCAAATTCAAAATATTCTAATACTGAAATGGTGGTATGCAAATCACATATACTTAGCATGAAGGCTAAAAAATAAAACTATTAAAAATAATTATAGTTACAATAATTTGTTAAGGAATACACAATATAAACAGATGCAAATTGTGACATCAGAAACA	GT	./.
chr7	150203478	N	N	<TRA>	0.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ACGGCAGCCTCCGCCCGGCCGCCGCCCCGTCCGGCCAGCCGCCCCGCCCGGGAGGGAGGTGGGGGGGCCAGCCCCCCGCCCGGCCAGCCGCCCCATCCGGGAGGTGAGGGGCGCTTCTGCACAGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCTGTCCGGGAGGGTGGTGGGGGCGT	GT	./.
chr7	150746657	N	N	<TRA>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTCCCCCAAAGCCAGGGGACCTCTTCCTTCCTACCAGCCATGGACTCCCCACCCCCCAGTGCCGATAAGACCTTTTCCTGCATTGACATAGCCTCTCCCTAATTGTACCTGTTTTTGGAGTTGGGATTTGGAGGTGGAGGGATGTGAGAGGGGGAGG;SVTYPE=TRA;CHR2=15;END=84810725;SVLEN	GT	./.
chr7	155050748	N	N	<TRA>	30	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCCTCCCCCCCCGCCCCCCTCCCCCCCCCCCCTCCTCCTCCCCCCCTCCTCCCCCTCCGCCTCCCCTCCTCCTCCCTCCTCCTCCTCCCTCCTCCTCCTCCCCCCTCCTCCTCCTCTTCCCCTCCTCCTCCTCCTCCCCTCCTCCTCCTCCTCTCCCCTTCTTCCTCCTCCTCCTCCTTTGAAACACAGCCTT	GT	./.
chr7	158510035	N	N	<TRA>	30	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAAGAAGAAGAAGAAGAAGAAGAGGAGGAAGAAGAGGAAGAAGAGGAAGGAGGAGAAGGAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAAGAAGAAGAAAAGAAGAAGAAAAGAGAAGAAGAAGGAAGAAGAAGGAGGAAGGAGGAAGGAGGAGGAGGAGGAGAAGGAGG;SVTYPE=TRA;CHR2=1;END=1	GT	./.
chr8	14088735	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAACAAAGAGAGAGAAAGAAAGAGAGAAAAAAAGAGGAACGGAGGGAAAGAGAGAAAGAAAGAGAGAGAGAGACAGACACACAGACAGGCAGGCAGGCAAGGAAACAGAGTAAGACAGAAGATAGGAACAGAGAGAGAGAGAGAGAGACAGAGAGACGCAGAAAAAGAAAGAGAGAGGCAGACAGACAGAGAAAG	GT	./.
chr8	18401664	N	N	<TRA>	42.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAGGAGGCCAAGATCGTACAACTGCATTCTAGCCAGGACGACAGAGTAAGACTATGTCTTAAAAAAAAAAAACAAAAAAAAACGGCTCAGATTGTCCCCTCCTAAGTCATTGCCCTCACCACAGGCATTTCCTAATTTTATTTGATTTTTTTTTTTTTTTTGGTTTGTTTCTTTGTTTTTTCTTTTAATAAAGGT	GT	./.
chr8	18768173	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAAAGAAATGTAAATCTGGACAAAAGCAGGAAGAAGA;SVTYPE=TRA;CHR2=21;END=29069171;SVL	GT	./.
chr8	26167656	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAGATATCTAGACCATCTTGGCCAACATGATGAAATCCCGCCTCTACTAAAAATACAAAAATTAGCTGGGATTACAGGTGCTGACCACCACACCTGGCTAATTTTTTTGTATGTTTAGTAGAGACGGGGCTTCATCGTGTTGGCCAGGTTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCCGCCTCAGCCTCC	GT	./.
chr8	43604917	N	N	<TRA>	12	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CATTCAGCAGGCTGGAAACACGCTTTTTGGAGAATATGCAATGGAACATTTTGGAAAGCATTGAGGCCTATGGGGAAAAATGAAATACCCCAAGATAAAAACTAGAAAGAATCTATCCATAAAATGCTTTGTGATGTGTGGATTCATCTCACAGAGTAAAACCTTTCTTTTAGATCGGAAGGGCGGCGTGTAGGG	GT	./.
chr8	69488212	N	N	<TRA>	33.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCCTAGTGACAAAGTAAATTATTTACCTGTTTAAACTTTGATTGATTTCCTAATTTGGACAAGTTGAATCATAATATATGCTTACTTTTTGGTATGATGAGCTGACATAATGCTAGTAGATGGTTGTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTCCTTTTTTTTTTATATTTTTTTTTT;SVTYPE=TR	GT	./.
chr8	70915408	N	N	<TRA>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGGGTGCCTGTAGTCCCAGCTACTCGGGAGGTTGAGGCAGAAGAATGGCGTGAACCTGGGAGGCGGAACTTGCAGTGAGCCAAGATTGTGCCACTGCACTCCAGGCTGGGTGACAGGAGCGGACCCCCTCCCCAAAAAAAAAAAAAAAAAAATTAGCTTGACGCAGTGGTGTACGCCTACAGTCTCAGCTACTCT	GT	./.
chr8	78518240	.	N	<DEL>	54	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAAAAGGTATCAAAACCAAAGAACCCATACAGAGAGTTGGTCCCTTGAAAGTACCCAGAAACAAAACTAAATGATGATACATAACATACATCACAGTCATATCCTTAAGGAAAAAACAATAAAACCTGTTTTATCAGAGACTAGGATGGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGAATCAAAA	GT	./.
chr8	98114145	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGTTTCTCTCCCCCTTGCTCTCTCTCTCTCTTCCTGTTCCTCTCTTCCTCCCTCTGTCTTTCTCTGTCTCTCTCTCTCTCTCCCTGTCTGTCTCTCTCTCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTTTCTCTTTCTCTGTCTCTCTCTCTCTTTCTGGGTGTTTCTCTCTCTCTCTCT	GT	./.
chr8	108635388	N	N	<TRA>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGTTCAGTGAGGCAATGGGAACATGCACGAACTGTCCAGATCCTGTGAAACTATGATAGAATTAAATCTTGTCTGCAGTCATCTATTCCAGGCTAAAATCTCATCAGGAAAAGGCATCAATTCAGTGTAGATCTCGGGGGGCGCCGTATCATTAAAACATTCTGGACTGAGTCCACAAGAATAACTTTTTGAGGT	GT	./.
chr8	112168293	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTTTTTTTTTTTTTTTTTTTTTTGCGGTTTTAACTAAATCCTAAATTTTTTTTGGGTTACAAGTCCCCAAACTAATGCTTTCAAATTTTTTTTTTTTTTTTATTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTTTTTTTTTTTTTTATTTTATTTTTTTTTTTTTTAATTT	GT	./.
chr8	124682433	N	N	<TRA>	30	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCCTCCCCCCCCGCCCCCCTCCCCCCCCCCCCTCCTCCTCCCCCCCTCCTCCCCCTCCGCCTCCCCTCCTCCTCCCTCCTCCTCCTCCCTCCTCCTCCTCCCCCCTCCTCCTCCTCTTCCCCTCCTCCTCCTCCTCCCCTCCTCCTCCTCCTCTCCCCTTCTTCCTCCTCCTCCTCCTTTGAAACACAGCCTT	GT	./.
chr8	131248115	.	N	<DUP>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGAGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGACAATAGCTTGAACTCGGGGGATGGAGGTTGCAGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTGGGCAACAGTGAGACTCCATCTCAAAAAAAAATAATTTCATGATGATAAAATTAAGAGGAACATGCATTTACTGAACTCCCATAACCTGG	GT	./.
chr8	134206863	N	N	<TRA>	7	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCCAGACCCACCCCCCCCCCCTCCACCACGCGCTCCCCAGCTATACACACCCCCCACACCCACACCCCCCACACACCACATAACCCTCTGCACACGCACACACCCCACACACCCCACACACAGCACACACCACACCATGTGCACACACACCCCACACACAGACACCACACACTGCACACACACCCCACCCCCC	GT	./.
chr8	144018247	N	N	<TRA>	5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTCTGTGTGTCTGTGTGTGTCTGTGTGTCTGTGTGAT	GT	./.
chr9	12354700	N	N	<TRA>	10.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAGACAGAGATAAAAAGAGAGAGAGAGAGAGAGAGAGAGAATTCACCTTTCCTCTGACTTTTTGTTCTATTTGGGCCCTCAGTTGATTGATTGAGAGAGGGTGGGTCTTTCTCACGCACCCCACTGAGATAAAAAGAGAGAGAGAGAGAGAGAGGCAGAGACAGAGACAGAGAGAAAGAGAGAGACAGACAGAGA	GT	./.
chr9	28031835	.	N	<INV>	60	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TACATAAGATACCCAAAGTAGTTTTACACAAGAGAGTGAGTGCTACAATACATGGGTATAAAAATGACATAACTCATTCTTTCTTTTTCCGCAGCACATGCTTAAATAAACTTATAGTTTCTCTTACTGGACTTACACTAAATAAATGTTATGAAGTAGATAAATGACTTTAATAAATTCCTTCCAAGCACACCA	GT	./.
chr9	28031863	.	N	<INV>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATATTATCCTCGTTTTCTAGGCTGACTTGCAAAGCCCTATCCTTCAAATATCACACATAAGGATATTTGAGTTCTTTGTGAGTTGCTGAAATTCTGGGCTTCTGGGCCACAAAAGCCAGGCTGAGCTTTCTTTTCGGAATTCACGCTTCACCATGATGCTCCAAATCCTCCTTAAAATACCTTCAATCTGGTGTA	GT	./.
chr9	28034299	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAGTGTTTCTATTCTGCCCCAATTTAATACCATCCTTACAAAGCTCACATCATGTGTGAAACTTATTGAAAAGTATAACCAGGATAATCTGCTAAATTCGTTAGGAAGACAGAAGATGTAGCTGACTTCAGTGAGAGTTTGAAGTGAATGCAACCCAAGTCATGTATAGTTCACTTGAAGGACATTTGTTCAGTC	GT	./.
chr9	35183587	N	N	<TRA>	28.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGCCTGCCTTGGCCCCCCAAAGCGCCGAGGTGGCGGCCGCCGCCCGGCCGCCGCCCCGCCTGGGAAGTGATGACCGCCCCTGCCTGGCCGCCCCTCGTCTGGGATGTGAGGAGTGCCTCTGCCCGGCCGAGACCCCATCTGGGAGGTGAGGAGCACCTCTGCATGGATGACACACCATCTGGGAAGTGAGGAGGG	GT	./.
chr9	42265244	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGATATCAGGCCTCAAGAGGATGGCAGTCACCAGGTAGACATCAGGCCTCAGATAGACACCAAGGTCCCAGATGTACAGCAGGCCCCAACTGAACCCCAGACTCATGTGGACATCAGGCCACAGGTAGACACCAAGCCTTAGGTAGATACCTAACTTCAGGTAGTCATCAGACCCAAGGTGGACACCCAGTCCCC	GT	./.
chr9	45105579	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CACAGAATTGGTGCTCAATGAAGATTTGTCCATCCAGATGAAGAATGGATGGGTGGCTGGATGGGTAGGCAGATGGATGATGAGTGGGTAGATGGGTAGGTGGATGGGTAGATGGGGATAGATGGATGATGAATGGATGAGTGGGTGGGTGGATGGAT;SVTYPE=DEL;CHR2=9;END=47163267;SVLEN	GT	./.
chr9	66783285	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCGTTGGAAACGGGAACGTCTTCATGAAAAACCGCGACAGAACCATTCTCAGACACTTCGTTGTGCTGTGTGCATTCAAGTCACAGAGTTGAATATTCCCTTTCACAGAGTAGGTTTGAAACACTCTTTTTGTAGTATCTGGAAGTGGACATTTGGAGCGCCTTGACACCTACGGTGAAAAGGGAAATATCTTCC	GT	./.
chr9	66783342	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCGTTGGAAACGGGAACGTCTTCATGAAAAACCGCGACAGAACCATTCTCAGACACTTCGTTGTGCTGTGTGCATTCAAGTCACAGAGTTGAATATTCCCTTTCACAGAGTAGGTTTGAAACACTCTTTTTGTAGTATCTGGAAGTGGACATTTGGAGCGCCTTGACACCTACGGTGAAAAGGGAAATATCTTCC	GT	./.
chr9	66971318	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCAACTCTGTTACTTGAGTACACACATCACAAGGAAGTTGCTGAGAATGCTTCTGTGTGGGTGTCAGGAGTACATACGTCCGCTTTCCCCATCGGCCTCAAAGCGCTGCAAATGTCCACTTCCAAATATTAGAAAAAGAGTGTTTCAAACAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG	GT	./.
chr9	69792579	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGCCTGGGCAGCGCTTTGACATACTTCAAGATGGCTTCTCGGAAGACTGGAGATAGCATCTTCTACAAGAATAGCTGAAAAGCTCATGAGTCCTTTAGGTATCCCCCAGACCAGTCAGAACAGACACATAGTAATTTGCGAGTAACATCTTCTCTTGTTCCTTTCGACCATGGACCAGTGTTCCTCACTGGGAAC	GT	./.
chr9	70930486	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATACGGCGACCCCCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTCTGCGATATGGCCAGTAATATCATCGTCTCTACCTTTGGATACTAGGAACAACATCACAGAGGGTGTGTACACCCCCTGCGATACTGAGAGTAATATTATGCTCTCCCCTTCGGGATATTAGGAACAATATCTCAGGAGGT	GT	./.
chr9	83033241	N	N	<TRA>	18	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCCTTCAAATGGCCACACTACCTCTCCAGTAAGTTTATAAATCAGTCCAAGATAGCTAAAATTACAGAAATCAAATTCAGAATATGAATAGAAATAAAGATCATTAAAATGCAGAAGTAACTTGAAACTCAATTCAAAAACGTTAAGAATCATAATGAAATGATACAGGAGCTGAGAGACAAAAGAGCAAGTATT	GT	./.
chr9	83033281	N	N	<TRA>	18	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TCCTTCAAATGGCCACACTACCTCTCCAGTAAGTTTATAAATCAGTCCAAGATAGCTAAAATTACAGAAATCAAATTCAGAATATGAATAGAAATAAAGATCATTAAAATGCAGAAGTAACTTGAAACTCAATTCAAAAACGTTAAGAATCATAATGAAATGATACAGGAGCTGAGAGACAAAAGAGCAAGTATT	GT	./.
chr9	102243322	N	N	<TRA>	60	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGGCTAAACAGCATGTAGGAAGTCATAGCTGGGGGGATTACACCCCAGGGCCAAGGCCTGGTGAGGTTTCAGGGAGGAGGCCTGCAGGATCTGGGAGGGGAGGGTGGGCGTTTTCTAATGATACGGCCACCACCGAGATCTACACTGATGATTCCCAAATTTACATCTTTAGCTCAGACATCTTAAAAGAATTC	GT	./.
chr9	102830541	N	N	<TRA>	18	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGCTCTCTCTGTGCTCTCCTCTTCTGCCAGTCCATGCCGCCCTGCGGTCCCCTTCTCTCCCTCCTCCCTCCATTCTCATCGGACGCTGTTTTTTAATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTGTCTCTGCCCAGCCGCCCATCGTCTGAGACGTGGGGAGCGTCT	GT	./.
chr9	103011837	.	N	<DEL>	52.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TAATATCAATGTCAAATTTTTTTAAAAAATAAAATTTCAATTAAGTAAAAGATAAAATTAATGATCATATTAAAGGAAATTCCCCATTTATGACTATTTGAATTTATTTTTATTTATTTATTTATTTGAGACAGAGTCTCACTCTCTTGCCCAGGCTGGAGTGCAGTGACCTGAGATTGAACCACTGCACTCCAG	GT	./.
chr9	109131113	N	N	<TRA>	35.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATTGGAGAATTTAATTCATTTTTATGTAAGGTAATTATTATAGGTAATAACTTACTATTGACAATTTTCCATTGTTTTTAAACTTTTTTTTCTTTTTATCTTGCTGTCTTCTTTTGTAATTTGATGTTTTTTTTTTTTTTTTGTGTTTTTTTTTGGTTTTTTT;SVTYPE=TRA;CHR2=6;END=107705880	GT	./.
chr9	132732525	N	N	<TRA>	54.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTGACGTGGGGTCCCACTCTGTGGCCCAGGCTGGAGTGCAGTGGCGCGTTCTCGGCTCACTGCAACCTCTGCCTCCTGCATTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTGCAGACATGCACAACCAAGCCCAGCTAATTTTTGTATTTTTAGTGGAGACGGGGTTTCACCATGTTGGCCA	GT	./.
chr9	133448968	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TACTTGGGAGGCCGAGGTAGGAGAACTGTGCGAACCTGGGATGCAGAGGTTGCAGTGAGCTGAGATTTTGCCATTGCACTCCAGCCTTGGCAACAAGAGTGAAACTCTGTCTTGGAAAAATAAATAAATAATAAATAAATAAATGAACTTCAAACCACAATGAGATGCTACAACACACCTATTAGAATGGCTAAA	GT	./.
chr9	137577045	N	N	<TRA>	3	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCCCATCCACCCATCCACCCATCCATCCCTCCCTCCACCCACCCCCCCATCCATCCATCCATCCACCCATCCACCCACCCACCTATCCATCCGCCTATTCATCCATCCAACCATCTGTTCATCCATTCATCCATCCATCCATCCATCCACCATCCATCCATCCACATCCATCCATTCATACATCCATCATCCTCC	GT	./.
chrX	2955017	N	N	<TRA>	30	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATATTATATATAATATTATATATTATATATAATATTATATATAATACATATAATATTAAAATATATATTATATTATATATAATATTATATATAATATATATTATGTATACTGACTCATAAATACATACTGACTCATATATATATTATATAATTATATAATATATATTAAATTTTATATGTATATTATATATAAAG	GT	./.
chrX	5654005	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTCCCTCCTTCCCTCCCTCTCTCCTTCCCTCTTTCCTTGCTTGCTTTCGTGCTTTCTTGCTTTCCTTTCTTTCTCTTTCTTCCTTTTCTTTCTTTCTTTCTTTCTTGCTTTCTTTTCTTTCATTCATTCCTTCTTTCTTTTCTTTCTTTCTTTTCTTTTTCTTTCTTTCTTGCTTTCTTTTCTTTCATTCATTCA	GT	./.
chrX	6270949	N	N	<TRA>	30	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATATATACAATATATATAATATAAAAAAAATATATAAACACACACACACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATATATATATAGAAAGAGAGAGAGAGGATCCATTTGGAATATGTAGGAGAAAGAATTCTGATAGGTGGACTCTCAATTTCTTTTTA	GT	./.
chrX	8789084	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCATCATCATCCCATTCATCACTGTCTTTGTCATCACCATCACCATCACCATCATCCTCATCATCACCACATTCACTGTCATCACTATGTTTGTCATCACCATCACCATCATCATCACATTCATCACTGTCTTTGTCATCACCATCATCACCATCACCATCATCCTCATCACATTCACTG;SVTYPE=TRA;CHR	GT	./.
chrX	31196942	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CATGGAAAGCAATAGCCAAACCAAGGTGTAAAGTGAATTAAAAGAAAAACACACAGTTGTGTGACTGCCATCAGAGTTAAGGCAAAAAAGAGGAGCAGGTTGAAAAGAGGTGAAGACGTCCCCTTTGATCTTGAGAATCATTACTACTTACTGTGAAGTAGTTTCCTGTGACTATATTTTCTTTTGAGTAGAAAC	GT	./.
chrX	31196943	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCACTGGCAGGTAGCCCAGTCGGGGATGCTTCGCAAAATACCTTTTGGTTCGAAATTTGTTTTTTAGTACCTTGGCAAAGTCTCGAACATCTTCTCCTGATGTAGTCTAAAAGGGAGATCATGGTGAATGTAGTGAATGTAGTGAAGATCGGGGGATAAAAAAGGGATGGTTAATGGGTACAAAAATACAGTAAG	GT	./.
chrX	31301203	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AATCATTATTTTAAAAGGCTTATCTAAAATAAGGTGTTCTTTGAACCAAGTGGAGTCTGATTTCCAATTTTAGAATGTTTCCACATTTAACACTGACATTCATTATCCTGAAAATGAAGGCAGATACACATAATATCTATATGTATTTTAAATAAAATTGGTTCAATAATTTTTCTCAAATTTCATAACTTTTTC	GT	./.
chrX	32077855	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATTCCCATGTTTATTGTAGCATTTTTACAGTAGCCAAGAGGTGTGAACAAACTAAATGTCTATTGACAGGGGAATGTATAAAGCTATGTTATATACATACAATGGAATATCATTCTGCCACAAAAAGGAAATCTTACCATATGCTACAATGTGGATGAATCTTGTAGCCATTTTGCTAAATAAAATAAGCAAGTC	GT	./.
chrX	32098533	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGTTTACTTAATTCACAATGGCTAGGACTTGCCAATGGGTATAGACGCCACCAGAAACTGGTGAACTATTTTTTAAAATCTCATAATATAAGAGGAATCATATTATTAACTGGCCACTATTCTGAGTTTTGAAAAACATTTTACAACTTTAAAAAATGATTCAAATAAAGCAAGGAGACGAGTAATGCAAGTAAT	GT	./.
chrX	34059778	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TAAGATTACCCAATTTACTGGCTGAATAGCCTAAAGATTGATTTTTCTTATATTTAACCAAATGCTTAAATCGCCTCAATCAAGAGTGATATGGTTTGGCTGTGTCCCCACCCAAATCTCATGTTGAACTGTATTTTGCATAACCCCCATGTGTCATGGGAGGGACCCAGTGGGAGGAAATTGAATCATGGAGAC	GT	./.
chrX	40521679	N	N	<TRA>	29	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATTTTTAGAGACAGAGCCTCATTGTCACCCAGGCTGGAGTGCAGTGGCATGATCAAATCCCACTGCAGTCTTGAACTCCTGAGCTCAAGCAATCCTCTTACCTCAGCCTCACAAGTGTCTGAAAATACAGGCACATGTCTCCCTGCTAACTTTTTTAAATTTTCTTGTAGAGAGAGGGTCTTGCTATAGCTGCTC	GT	./.
chrX	42828498	N	N	<TRA>	25	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATGTTTAGGTACATGAATATACATGTATATACATGAGATATATATATATATATATATAAAATATATATATATATATTATATATATATATATATAATATATATATATATATATTTGAGATGGAGTCTCACTCTGTTTCCCAGGCTGGAGTGTAGT;SVTYPE=TRA;CHR2=6;END=20232263;SVLEN=0	GT	./.
chrX	42828518	N	N	<TRA>	25	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATGTTTAGGTACATGAATATACATGTATATACATGAGATATATATATATATATATATAAAATATATATATATATATTATATATATATATATATAATATATATATATATATATTTGAGATGGAGTCTCACTCTGTTTCCCAGGCTGGAGTGTAGT;SVTYPE=TRA;CHR2=6;END=20232263;SVLEN=0	GT	./.
chrX	54458403	.	N	<DEL>	60	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GATCGAGACCATCCTGGCCAATATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATTTGCCGGGTGAGGTGGCACGTGCCTGTAATCTCAGCTACTTAGTAGGCTGAGGCAGGAGAACCACTTGAATCCGGGAGGTGGAGGTTGCAGTGGCAAGATCACGACTCACTGCAGCCTCGAACTCCCTGACTCAAGC	GT	./.
chrX	58477320	.	N	<DEL>	10.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTGATACACATTTTTTAATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTGTTCCGATCTGTCTTTTTGTAGTATCTACAAATGGATATTACCAGTGCTTTGAGGCCTATGGTGAAAAAGGAAATATCCTCACATAAAATTCAGATGGAAGCATTCTTAGAAACTCCTTTGTGATGTGTAC	GT	./.
chrX	58544819	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTGTGACGGGTGCATTCATCACACAGAGTTGAACCTTTCTTTTGATTGAACATTTTTGAAAAACTCTTTTTGTATAATCTGCAAGTGGATATTTGGAGCGCTTTGAGGCCCTTGCTGGAAAAGGAAATATCTTCCCATAAAATCTAGACAGGTGATTCTGAGAAGCTCCCTTGTGATGCGTTCCTTCATCTCAC	GT	./.
chrX	58563931	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TAACCGCATCCCCGCTTGCATTTTTCTTTTTTAATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTATCCCAAAGAAGTTTCTGAGAATGCTTCTCTTTAGTTTTTACGTGAACATATACCCGTTTCGACCGAAGGCCAGACAGTGGTCCAAATATCCACTTGCAGATTCT	GT	./.
chrX	61714921	.	N	<DEL>	2	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTTTCCACCACAGGCCTCAAAGCCCTTCAAATGTCCACTTGCAGATTCTAGAATAAGAGGGTTTCAAAGCTGCTCTGTCTAGAGGAAAGTTCAATTCCTGAAGTGGAACGCAAACATCACAAAATAGTTTCTGAGAATGCTTCCATCTAGTTTTTATGTGAAGATTTTCCTTTTCCACCACAGGCCTCAAAGCCC	GT	./.
chrX	73787697	N	N	<TRA>	16	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAATAAAAAAAAAAATAAATAAATAAAAAATAAAAAATAAAAAATAAAAAAATAAAAAAATAAAAATAAAATAAAATAAAAAAAAGGAAAAAAATAAAAAAAATAAAAAAAATAAAAAAAAAAAAAAAAAAAAGGGCTTTTCTGGAAGGGATTCATCTCAGGACCTGGGCCCCTACTA;SVTYPE=TRA;CHR2=	GT	./.
chrX	74490934	N	N	<TRA>	60	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAGACCTCTACAAGAAAAACCACAAAACACTGCTGAATGAAACCACAGATGACACAAACTAACGGAAACACATCTCATGCTCATGGATGCATCGGTAGAGTTAACACTGTTTTTAATGATACGGCGACCACCGAGATCTACACATTCAATGCAATTCTCATCAAAATACTAATATCATTCTTCACAGAATTAGAA	GT	./.
chrX	79792424	N	N	<TRA>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTTTTTTTTTTTTTTTTTTTTTTGCGGTTTTAACTAAATCCTAAATTTTTTTTGGGTTACAAGTCCCCAAACTAATGCTTTCAAATTTTTTTTTTTTTTTTATTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTTTTTTTTTTTTTTATTTTATTTTTTTTTTTTTTAATTT	GT	./.
chrX	81316121	N	N	<TRA>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=;SVTYPE=TRA;CHR2=7;END=100388995;SVLEN=0	GT	./.
chrX	117178397	N	N	<TRA>	49.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAGAAATCCCAAAGCAAGACTGAAAAAAAAAAAAAAAAAAAGGAAAATCAGAAGAATCACATTACCTCACCTCAAATTATACTCTAGAGCTACAGTAACCAAAACAGCATGGTGCTGGAATAAGAAAAGACACATAGACCAATGGAACAGAATAGAGAACCCAGAAATAAATC;SVTYPE=TRA;CHR2=10;EN	GT	./.
chrX	129697093	N	N	<TRA>	6.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TTGCTTCCCTTTCCTTCCCTTCCCTTCCCTTCCATTCCATTACATTACATTCCCTTCCATTCCATTCCATTCCCTTCCATTCCATTCCGTTCCATTCCACTCCGGTTGATTCCATTCCATTCCATTCCATTCCATTCCATTACACTAAATTCCATTCCATTCCACTCCATTACATTCCACTCCACTCCACCCGGA	GT	./.
chrX	136015247	N	N	<TRA>	15	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCTTCGTGCCTTGTGAAAACTTGCTTATAGACTTTACCAAAATGCCCCGTGCCAGAGGCTATCCGTTTATGCTAGTGTTTATTTGCACTTTTTCAGGATAGGTTGAGGCATTCCCCACCAAGACAGAAAAGCACGAGAAATGACTAAAGTACTACTAAAAGACATTATCCCTAGGTTTTGACAGCCTGTAACTTT	GT	./.
chrX	141107439	N	N	<TRA>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGGTCACCCGCCAACACATCCTACTAATTTTTTGTGTTTTTAGTAGAAATGCGGTGTCGCCATGCGGCCCAGGCTGGTCTTGAACACCTGACCTCATGATCCACCTGCCTCCACGGCTGAAAGTGCTGGGATTACAGACTTGATCAACCGCGCCCAGCCAAATATCTTCTTTTGAAAAGAGTCTGTTTATATTCT	GT	./.
chrX	148502574	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGCCCCGCCGGCCGCCCCGTACGGGGCGGCGGCCGGGGGGCCGCCCCCTCGCCCCCCCCGCCTTTTTTAATGATACGGCGACCGCCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTCTGCCCGGCCAGCCGCCCCGTCCGGGGGTCGGAAGAGCGCACGTCCGCACCCCCGTCCCGACCGGCCCG	GT	./.
chrY	5009128	N	N	<TRA>	20.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGCTGAGATCACGCCACTGTACTCCAGCCTGGGCAACAGAGTGAGACTCTGTCAAAAAAAAAAAAGGGAGAAAAGGGGCCAGGGATTATTTGGAGCAATGGCTGATTCCAGCCTAAAACAGAAAATGTATGTGATAAGCCAGGACCTCTTATAGCACAAAACAAGGAAAGTGCTCAAAAAAAGCATGGTGGCAGG	GT	./.
chrY	9956770	N	N	<TRA>	20.5	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CATACCCCCTCTCCGCGGCGTCGCCTTTCCTAAGCCCCTCGCGCCACCTTACGACAAACACCCACAGGTGTGGAGGGGCACCCCACCCCTACACTATGTGAGGGACAAACCTTCAGACCACAGCAGGAGTGTTCTGGAATCCCCTGTGAGGAACAAACATTCAGACCCTCGTAGCAGTGTTCTGAAATCCTATGT	GT	./.
chrY	13138838	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAGAGGGATGGAATCGAGTGGGGAGGGGTGGAATGGAATGGAGAGGAATGGTATGGAATGGAATGTAGTGGAAGGGAATGGGATGAAATGGAGTGGAGGGGAATGGAGTGGAATGGAATGGAGTGGAATGGAGTGGAGTGCAAGGGAGTGTAATGAAGTGGAGAGGAATGGAAGGGAATGGAATGGATTGTAGCG	GT	./.
chrY	13139549	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GCCCCTCCACCCCACTCTACTCTACTCCACTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCACTCCCCTCCACTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCACTCCACTCCACTCCACTCCACTCCATTCCATTCGGGTTGATTCCATTCCATTCCATTCCATCCCAATCGGTTTGAT	GT	./.
chrY	13196469	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AGGAATGGAATGGAGTCGACAGGAGGGCAATGGAATGTAATGGAAAAGAAAGGAATGGAATGTAGTGGAGTGCAGTTGAGTGGAATGGAGGGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGACTCAAAGGGAATGTACTTGAATGGAATGGAATAGTTTGGAAAGGAATCC;SVTYPE=INV;	GT	./.
chrY	13253178	N	N	<TRA>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AAAAAAAATTCGCCGCCAAGAAGCGTTCCTGGTTCCCCCACGGACGAAAGTGCCTTCCCGTCAGTCCCTGCGCTGGGCCTGGGATACTCTGGCGGCCCTGGCTCGAACCCAGAGAGCGACTCAGGCCCGCTAGGGGTACGCCAAAGCGGGCAGAAGGCCCCGGAGGGGAAGGTTAGGTTTGAGGAAAGGGAGGTG	GT	./.
chrY	13453699	.	N	<INV>	1.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CTAATGGAATCGAATTGAATGGAAAAGAATCGAAAGAAATGGAAAGGAATGGAACAGAACGGATTCGAATGGAAAGGAATGGAATCTAATGGAATGGACTGGAAATGAATGGATTCGAATGGAATGGAATCGAATGGAATGGAGTCATATGGAATGGAATGGAATGGAACAGTCTCAAGTGGAATGGAATGGAAT	GT	./.
chrY	13649005	.	N	<DUP>	20.5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTACCATGGCATGGCATGCGATGGAATGGAATGGAATCGAAAGGAAAGCAGCGGAAGGGAATGGAGGGGAATCAAGTGGAAAGGAATGGAATGGAATGGAATGTAAAGGAATGGAATGGAATCGAATGGAATGGACTGGAATGGAATGGATTGAACGGAATGGACTGGGGAGGAATGGACTCGGATGGAAAGGAA	GT	./.
chrY	13653714	.	N	<DEL>	6	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTATGGAATGGAATCGAAAGGAAAAGAATTGAATGGAATGGACTGGAACAAAATGGAATTGAACGGATTGGAATCGAACAGAATGAAACGGAATGGAATGGAATGGAATGGAATGGACTGCAGCGGAATGGAGTCGAATGGAAAGTAATCGAATGGAATG;SVTYPE=DEL;CHR2=Y;END=13664646;SVL	GT	./.
chrY	13658875	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATAAGAAATGAAAAGAATGTAATGGAATCGGATGGAATGGAATTGAATGTATTGGAGTCGAGTAGAACAGAATTGAATGCAATGGCATCAAATGGAATGCAAACGAAAGGAATGGAATTGAATGGACTCAAATGTTATGGAATCAAAGGGAATGGACTCAAATAGAATGGACTCAAAAGAAATGGTCTTGAATGG	GT	./.
chrY	13664421	.	N	<DEL>	1	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CATTGGAACGGAAATCAATGGAATGGAATAGAATGCAATGCAATGGAAAGGAATGGAGTGGAATCGACAAGAATGGAAAAGATTGGAATGGAATTGAATGGAATGGAATCGAATGGAATGGACTGGAATGCAATGGACTAGAATTGAATGAATAGGAATGGAACGGAACGGAATGTAACGGAATGGAATGGAATG	GT	./.
chrY	13683089	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATGGATTGAACGGAATGGACTGGAGAGGAGTGGACTCGACTGGAAAGGAAACGAGTGGAATGGAGTGGAATGGCTTGAAATGGATAAGAAATGAAAAGAATGTAATGGAATTGGATGGAATGGAATTGAATGTATTGGAGTCGAGTAGAACAGAATTGAATGGAATGGCATCGAATGGAATGGAAACGAAAGGAA	GT	./.
chrY	13683134	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATGGATTGAACGGAATGGACTGGAGAGGAGTGGACTCGACTGGAAAGGAAACGAGTGGAATGGAGTGGAATGGCTTGAAATGGATAAGAAATGAAAAGAATGTAATGGAATTGGATGGAATGGAATTGAATGTATTGGAGTCGAGTAGAACAGAATTGAATGGAATGGCATCGAATGGAATGGAAACGAAAGGAA	GT	./.
chrY	13693196	.	N	<DUP>	12	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AATGTATTGGAATGGAAACGAATGGAATGGAATGGACTTGAACGGAATAGACTGGAACGTAGTGGACTGGAAAGGAATGGACGGGAATGAAATGGAATCGAATGACGTGGATTGAAATGGAATGGAATCGAAAGGAATGGAATCGAATAGAATGGAATCTAATGGAATGGCAACCAATGGAATGTAATAGAATGG	GT	./.
chrY	13720474	.	N	<INV>	2	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CATTCAATTCCTTTCCATTAGATTCCATTCCATTCGATTGCATTCCATTCGAGTCCATTCCTTTCGAGTACATTCCATTCGAATCCATTCCATTGGAGTCCATAGCATTCCATTCCATTACATTAGAGCCCATTCCATTCCATTCCATTCTATTCTGTT;SVTYPE=INV;CHR2=Y;END=58972228;SVLE	GT	./.
chrY	13721547	.	N	<DUP>	5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGACCGCATCTCCTTCCCTTGAAGACGCTGTTCCGGAATGGAATGGAATGGAAAGGAATGGAATCGAATGGAATGAAACTGAATGCAAGGGAATGGAATGGAATCATCCGGAATGGATTGGAATGGAATGGAATGGAATGGAATGGAATCGAATGGAATCAACCTGAGTGCAGGGGAATGGAATGGAATGATCC	GT	./.
chrY	13721590	.	N	<DUP>	5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GGGACCGCATCTCCTTCCCTTGAAGACGCTGTTCCGGAATGGAATGGAATGGAAAGGAATGGAATCGAATGGAATGAAACTGAATGCAAGGGAATGGAATGGAATCATCCGGAATGGATTGGAATGGAATGGAATGGAATGGAATGGAATCGAATGGAATCAACCTGAGTGCAGGGGAATGGAATGGAATGATCC	GT	./.
chrY	13721946	.	N	<DUP>	5	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGAGTGGAAGGGAAGGGAAATGAAAGGAATTGAATGGAATGGAATGGACCGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGTATCTACCCGAGTGCAGGGGAATGTAATGGAACGGAATGCAATGGAATGGAATCATCCGGAATGGAACGGAATGGAATGGAATGGAATGGAAT	GT	./.
chrY	13722498	.	N	<DEL>	18.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTCTCGAATGGAATGGAATCGAATGGAATGATATCAAATGGAATTGAATGGAACGGAAAAGATTGGAGTGGTATGGAATGAAATTGACACAACTGAATTGACTGGAATGGAATGGAATGTACTCGAATGAAATGGACTGAATGGAATGGCCTCGAAAGGAATGGAGTCGAATGGAAAGGAATCGAAAGGAATGGA	GT	./.
chrY	13722562	.	N	<DEL>	18.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GTCTCGAATGGAATGGAATCGAATGGAATGATATCAAATGGAATTGAATGGAACGGAAAAGATTGGAGTGGTATGGAATGAAATTGACACAACTGAATTGACTGGAATGGAATGGAATGTACTCGAATGAAATGGACTGAATGGAATGGCCTCGAAAGGAATGGAGTCGAATGGAAAGGAATCGAAAGGAATGGA	GT	./.
chrY	13723587	.	N	<INV>	0	PASS	PRECISE;CT=5to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGCAATAGAATCGAATGGAATGGACTCGATTGGAATGGACTGGAATGGAATGGATTCAAAAGGAATGGAATAAAATGGAATGCAATCGAATGGAATGGAATCGAATGGAATGGAACGGAATGGAATGGAATGAAATGGAATGGAATGATATGGAC;SVTYPE=INV;CHR2=Y;END=58972951;SVLEN=45	GT	./.
chrY	13747899	.	N	<DUP>	10	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CCTTTAAAGTCCATTCTATTCCATTCCATTCATTTCCATTCCATTCGAGTAAAGTCCACTCCAGTCCTTTCCATTCCAGTCCATTCCTCTCCAGTCCATTCCGTTCAATCCATTCCATTCCAGTCCATTCCATTCGAGTCCGTTCCATTCCATTCCATTCCATTGGAGTCAATTCCATTCCGTTCGATGTCTTTC	GT	./.
chrY	13806615	.	N	<INV>	14.5	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CACCTCCATTCCGTGCCATTCCACTCCTCTCCGCTGCACTGCACTCCACTGCCCTCCCTTCCACTCCATCCCATTCCATTCTGCTCCATTCCTCTGCATTCTTCGCGACCCCCCTCATCTCCACTCCATCCCACTCCATTCCATTCCATTCAATTCCATTCCATTACAATTCGTTCCATTCCATTCTTTTCCGTT	GT	./.
chrY	13811870	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=AATCGAATGGAATGGAATCGAATGTAATGGAACCAAAAGGAATGGAATGGGATAGAATGGAATGCAATGGAATGGAATGGAGTAGAATCAATTGGAATGGAATGGAATCGAATGGACTGGAATCGAATGGAATGGAATGGAATTGAATGGAATTGATTCGAATGGAATGGACTCAAGAGGAATGGTCTTGAATGG	GT	./.
chrY	13816660	.	N	<DEL>	4	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=GAAGGGAAGGAAAGGAAAGGAAACCACCCGAATGGAATGTAATGTAATGGAGTGTAAGGGAATTGAATAGAATCAATCCGAATGTAATGGAATGGAATGGAACAGAATGGAATGGAATGGAATCGAATGGAATGGAATGGAATGCAATGGAATGGGATCAACCCGAATGCAGGGGAATGGAATGGAATGGAATGG	GT	./.
chrY	13822987	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATTGAAGGCAGTGGAGGGGAGGAGAGTGGAAGGGATTAGGAATGGAATGGAATGGGAAGAAAATGAATTGAACAGGGTGGAGTGGAGTAGATAGGAATGGAGTGGAGTAGAATCGAATGGAATGGAATGAAATGGAAAGCAAAGGAACTGAGTCGAGTCAA;SVTYPE=DEL;CHR2=Y;END=28801367;SV	GT	./.
chrY	13825956	.	N	<DEL>	23.5	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=TGGAGTGTAGTGGAGTGGAATGGAATGCAGTAGAGTGGAAAGGAATGGAGTGGAGTTGAAAGGATCGGAGTGGAGAGGAGTAGAATTGAGTGGAGTGAAGAGGAGTGGACTGGAGTTTAGTGGCGTGGAGTCGCGTGGAACAGAATGGAACGGAAAGGAATGGAATGGAGTAGAATGGAGAGGAATGGAATGGAA	GT	./.
chrY	13847354	.	N	<DEL>	0	PASS	PRECISE;CT=3to5;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTTGGAGTGGAAACGAATGGAATGGAGTGGAATGGAATGGAAAGGAATGAAATGGAATTGATTGGAATGGAATCGAATGAAATGGAGTTGAATGGAATCAAAAGGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCT	GT	./.
chrY	13847395	.	N	<DUP>	0	PASS	PRECISE;CT=5to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTTGGAGTGGAAACGAATGGAATGGAGTGGAATGGAATGGAAAGGAATGAAATGGAATTGATTGGAATGGAATCGAATGAAATGGAGTTGAATGGAATCAAAAGGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCT	GT	./.
chrY	13858372	.	N	<INV>	0	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=ATTCCATTCCATTGGATTCCATTCCATTCTATTTCATTCCTTTGGATTCCATTCCAATGGAGCCCACTACATTCGAGTCCTTTCCAATCCATTCTATTCCTTCCCATTCCATTCCATTTCATTCCATTCGGTTATATTACATAACATTGAAAGCCATTCCATTCAAATACATTCCATTACAATCAACTGCATTCC	GT	./.
chrY	13861275	N	N	<TRA>	23	PASS	PRECISE;CT=3to3;CIPOS=-10,10;CIEND=-10,10;SOMATIC;CONSENSUS=CAATGGAATGGAATGGGATGGAATGGAATGGCATGGAATGGCTAAACGAAATGTGAGTTAAGATTGTACCACTGGACTCCAGTCTGGGTGACATTGTGAGATCCAGTCGAAATAAAGGAATGGAAAAGAGTAGAAAGGAATAGAATAGAGGGGAGAGGAAGGGA;SVTYPE=TRA;CHR2=5;END=56426678	GT	./.